Vitreoscilla filiformis: VITFI_CDS2414
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Entry
VITFI_CDS2414 CDS
T04960
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vff03032
]
VITFI_CDS2414
03400 DNA repair and recombination proteins [BR:
vff03400
]
VITFI_CDS2414
Enzymes [BR:
vff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VITFI_CDS2414
DNA replication proteins [BR:
vff03032
]
Prokaryotic type
DNA Topoisomerases
VITFI_CDS2414
DNA repair and recombination proteins [BR:
vff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VITFI_CDS2414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ASM78192
UniProt:
A0A221KGL8
LinkDB
All DBs
Position
complement(2544949..2547618)
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AA seq
889 aa
AA seq
DB search
MPLFAGLLEPMTPFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLY
AMHELNNDWNRPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRHMLVDGQGNFG
SIDGDNAAAMRYTEIRLAKVAHDMLADIDRDTVDFGPNYDGSESEPLVLPARLPNLLVNG
SAGIAVGMATNIPPHNLNEVVDACLHLLRVPEASIDDLMDIIPAPDFPTAGIIYGVAGVR
EGYRTGRGRVVMRARVHFEEIDRGQRQAIVVDEIPYQVNKKTLLERIAELVHEKKIEGIS
HIQDESDKSGMRVVIELKRGEVPEVVLNNLYKQTQLQDSFGINMVALVDGQPRLCNLRQL
LEIFLEHRREVVTRRTVFELRKARERGHVLEGLAVALANIDRFIEIIKTSPTPPVAKMAL
MGENWDSSLVRDMLARAEGQTPGGRDAYRPESLPPQYGMQVDGLYRLSDGQAGEILQMRL
QRLTGLEQDKILGEYRDVMAQIADLLDILAKPERVTAIIADELSALRQEFGQTKLGARRS
VIEHNVQELGVEDLITPTDMVVTLSHTGYIKSQPLAEYRAQKRGGRGKQATTTKEDDWID
QLFIANTHDWILCFSNRGRVYWLKVWEVPQGSRTSRGKPIVNMFPLQDGEKVTVVLPLTG
EFRSFPADHYVFMCTALGTVKKTALDEFSHPRKAGIIAVDLDEGDYLIGAALTDGHHDVM
LFSDGGKAVRFAEDDVRPMGRQARGVRGMMLDEGQRVIAMLVAEDETQSVLTATENGYGK
RTPIGEYTRHGRGTKGMIAIQQSERNGKVVAATLVRGNDEIMLITDKGVLVRTRVAEIRE
MGRATQGVTLIALDDGATLCGLQRIVENDASADIEPGAVPVPSSEQESL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgccactttttgctggcttgctcgaacccatgactccattcgcgaaggaaaccctgccc
atcagccttgaggaggagatgcgccgctcctaccttgactatgcgatgagcgtgatcgtg
gggcgcgcccttccggatgcacgcgatggcctcaagcccgtgcatcgccgtgtgctctac
gcgatgcacgagctgaacaacgactggaatcggccctacaagaaatcggcgcgcatcgtt
ggtgatgtgatcggtaagtaccacccgcacggagacacggcggtctacgacacgatcgtg
cgcatggcccaagatttcagcttgcgccacatgctggtcgatggccagggtaacttcggc
tcgattgacggtgacaacgccgcagcgatgcgctacaccgagattcgcttggccaaagtc
gcccacgacatgctggcagacattgatcgagacacggtggatttcggcccgaactacgac
ggctccgaaagcgaacccctggttctgcccgctcgattgcccaatctgctggtgaatggc
tcggcgggcatcgcggtggggatggccaccaacattccgccccacaatctcaatgaggtg
gtggacgcctgcctgcacctgttgcgtgtgcctgaggccagcatcgatgacttgatggac
atcatcccggcaccggacttcccgaccgccggcatcatttacggtgtggctggggtgcgc
gaaggctatcgcacgggtcggggccgggtggtgatgcgcgcccgggtgcatttcgaggag
atcgaccggggtcagcgccaagccattgtggtggatgaaatcccctatcaggtcaataaa
aagacgctgctggagcgcatcgccgagctggttcacgagaaaaaaatcgagggaatcagc
cacatccaagacgagtcggacaaatccggcatgcgcgtggtgattgaactcaagcgcggt
gaagtgcctgaggtggtgctgaacaacctctacaaacagacgcagttgcaggacagcttc
ggcatcaacatggtggccttggtggatggtcagccgcgtttgtgcaacctccggcagttg
ttggaaatcttcttagagcaccgtcgcgaggtggtgacgcggcgcacggtgttcgaactg
cgcaaagcgcgtgagcgcggccatgtgctcgaaggtctggccgtggccctggccaacatc
gaccgcttcatcgagatcatcaaaacttcgcccacaccgcctgtggccaagatggcgctg
atgggcgagaactgggactcgtccttggtgcgcgacatgctggcgcgtgctgagggtcag
actcctggtggacgcgatgcgtatcgccccgagtcgctgccgccgcagtacggtatgcag
gtggatggcctctaccggttgtcggatgggcaagcgggtgaaattttgcagatgcgcttg
cagcgtctgaccgggttggaacaggacaaaatcctgggcgaataccgcgatgtcatggca
caaatcgccgatctgctggacatcttggccaagcccgagcgtgtgacggcgatcatcgcg
gacgagttgagcgcactgcgccaagagtttggtcagaccaagctgggtgcgcgccgttcg
gtgatcgaacacaacgtgcaggagctgggggtcgaggatctgatcacgcccaccgacatg
gtggtgaccctgagccacaccggttacatcaagagccaacctctggccgagtaccgcgcc
caaaagcgtggcgggcgcggcaagcaggccaccacgaccaaggaagatgactggattgac
cagctcttcatcgccaacacgcacgattggattttgtgcttctcgaaccggggccgtgtt
tactggctgaaggtgtgggaagtgccgcagggcagccgcacgtcgcgtgggaaacccatt
gtcaacatgttcccgctgcaagacggcgagaaggtgaccgtggtgctgccactgacgggt
gagttccgcagcttcccggcggatcactacgtgttcatgtgtacggccctgggcacggtc
aagaagaccgccctggatgagttcagccatccgcgcaaggccggcatcattgccgtcgat
ttggacgaaggggactacctgattggcgccgccctcacggatggccaccacgacgtgatg
ctgttcagcgatggtggtaaagccgtgcgttttgccgaggacgatgtgcgtcccatgggg
cgccaggcacgcggggtgcgcggcatgatgttggatgaaggccagcgcgtcatcgccatg
ctggtggcggaggacgagacacagagcgtccttaccgccaccgagaacggctacggcaag
cgcacacccatcggggaatacacccgccatggccggggcaccaagggcatgatcgccatc
cagcagagcgaacgcaacggcaaggtggtggccgcgacattggtgcgtggcaacgatgaa
atcatgctgatcaccgacaagggggtgctggtgcgcacccgcgtggctgaaattcgcgaa
atggggcgtgcaactcagggggtcacgctcattgcgctggacgatggtgccacactgtgc
ggcctgcaacgcattgttgaaaatgatgcgtcggcggacattgagcctggcgccgtgcca
gtcccctcttctgaacaggaatctctctga
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