KEGG   Vitreoscilla filiformis: VITFI_CDS2553
Entry
VITFI_CDS2553     CDS       T04960                                 
Name
(GenBank) DNA-directed DNA polymerase
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vff  Vitreoscilla filiformis
Pathway
vff03030  DNA replication
vff03430  Mismatch repair
vff03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vff00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VITFI_CDS2553
   03430 Mismatch repair
    VITFI_CDS2553
   03440 Homologous recombination
    VITFI_CDS2553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vff03032]
    VITFI_CDS2553
   03400 DNA repair and recombination proteins [BR:vff03400]
    VITFI_CDS2553
Enzymes [BR:vff01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VITFI_CDS2553
DNA replication proteins [BR:vff03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VITFI_CDS2553
DNA repair and recombination proteins [BR:vff03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VITFI_CDS2553
SSDB
Motif
Pfam: RNase_T RNase_H_2 ACP_PD
Other DBs
NCBI-ProteinID: ASM78330
UniProt: A0A221KHQ5
LinkDB
Position
complement(2699868..2700602)
AA seq 244 aa
MRQIFLDTETTGLSPDAGDRVVELACVEMDGRRLTGQHRHYYLNPERKNGEEAVRIHGLT
DAFLADKPKFAEVADDFLAFVAGAELIIHNAAFDMGFLNAELKRLGRPPLSQTVAAVTDS
LQMARETYPGKANSLDALCRRLEVDNSSRTFHGALLDCELLAEVYIRMTRGQHSLVIDEA
QADASTVQKTVQTLDALDLRSVVLPVIEPDPIEAQAHEMALKELDKSSGGLALWRNLSHN
RSLS
NT seq 735 nt   +upstreamnt  +downstreamnt
atgaggcagatttttctggacacggaaaccacgggcctgtctcctgatgctggggatcgg
gtggtcgagctggcgtgtgtggagatggatggccggcggttgacggggcaacatcggcac
tactacctcaacccggagcgtaaaaacggcgaagaggcggtgcgcatccacggcctgacc
gatgcgtttctggccgataaacccaagtttgcggaggttgccgatgattttctggcgttc
gttgcgggcgctgagctgatcatccacaacgcggcgttcgacatgggctttttgaacgcc
gagctcaaacgccttgggcgcccgccgttgagccaaaccgtggcggcggtgaccgacagc
ctgcaaatggcacgggaaacctaccccggcaaggccaactcgttggatgccctgtgccgg
cgcttggaggtggacaactccagccgcaccttccacggcgctttgctggactgcgagttg
ctcgccgaggtgtacatccgcatgacacgcggccagcactcgctggtcatcgacgaggcg
caagcggatgcctcaaccgtccaaaagaccgtgcagacgctggatgcgctggatttgcgc
agtgtggtgttgccggtgatcgaacccgatcccatcgaggcccaggcccacgagatggcg
ctgaaagaacttgacaaatccagtgggggacttgcgctgtggagaaatctttcccataat
cgcagtctttcctga

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