Vitreoscilla filiformis: VITFI_CDS2669
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Entry
VITFI_CDS2669 CDS
T04960
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
vff
Vitreoscilla filiformis
Pathway
vff03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VITFI_CDS2669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vff03400
]
VITFI_CDS2669
Enzymes [BR:
vff01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
VITFI_CDS2669
DNA repair and recombination proteins [BR:
vff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VITFI_CDS2669
Prokaryotic type
VITFI_CDS2669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
EndIII_4Fe-2S
HHH_8
HHH_3
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ASM78446
UniProt:
A0A221KHF6
LinkDB
All DBs
Position
complement(2820164..2821228)
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AA seq
354 aa
AA seq
DB search
MSGCADDLAQRVVAWQRTQGRHDLPWQRQRDPYRVWLSEIMLQQTQVSTVLGYYARFLAR
FPDVATLAAAEVDEVLALWAGLGYYSRARNLHRCAREVMAQWGGAFPRTAAQLAELPGIG
PSTAAAIAAFCFDERAAILDGNVKRVLSRALGFGDDLAQVRHERRLWALAQALLPVAADM
PAYTQGLMDLGATLCTPRQPRCLLCPLASDCVARAQGQPEAYPVKTRKLRRGQRAHALLW
LCHGDAVWLERRPDTGVWAGLWSWPEFDDVTALCAWLHGWPGTLTVAPTLTHVLTHLDWA
LTPVHVRLPDDLSAWPDAVMAQLVQRSPRGRWVPRAEWAQTGMPAPLRQWLGVG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtgcgccgacgatctggcccagcgcgtggtggcatggcagcgcacccaaggg
cggcacgatttgccttggcagcgccagcgcgacccgtaccgggtgtggctgtctgaaatc
atgttgcagcagacccaggtcagcaccgtgctggggtactacgcacgctttttggcgcgg
ttcccggacgtggccacgctggccgctgccgaggtggacgaggtgctggcgctgtgggcc
ggtttgggttactacagccgggcgcgcaacctgcaccgctgtgcccgggaggtgatggcg
caatggggaggcgcgttcccgcgcacggcggcacaactggccgagctgccgggcatcggc
ccttcgaccgcagcggcgatcgccgcgttttgtttcgacgaacgggccgcgattcttgat
ggcaacgtcaagcgggtgttgagccgtgcgcttgggtttggggacgatttggcgcaggtg
cgccacgagcgtcggttgtgggcacttgcgcaggcactgctgcccgtggcggcggacatg
ccggcctacacccaaggcttgatggatctgggtgcgacgctgtgtacgccccgccagccg
cgttgcttgctgtgcccgttggcgtccgattgtgtggcgcgtgcgcaggggcagccggag
gcttatccggtcaagacgcgcaagctgcgccggggccaacgcgcccacgcgctgctgtgg
ctgtgccatggcgatgccgtgtggttggagcggcggccagacaccggcgtgtgggctggg
ctgtggagctggccggagtttgacgatgtgacagcgctgtgtgcttggttgcacggttgg
cctggcacgctcaccgtggcaccgaccctgacccacgtgctgacccacctggattgggcg
ttgacgccggtgcatgttcgattgcctgacgatctgtccgcgtggcccgatgccgtgatg
gcgcagttggtgcagcgttccccgcgagggcgctgggtgccccgggccgagtgggcgcag
acgggcatgcccgccccgttgcgtcagtggctgggtgtgggctga
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