Vitreoscilla filiformis: VITFI_CDS2681
Help
Entry
VITFI_CDS2681 CDS
T04960
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vff03000
]
VITFI_CDS2681
03036 Chromosome and associated proteins [BR:
vff03036
]
VITFI_CDS2681
Transcription factors [BR:
vff03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VITFI_CDS2681
Chromosome and associated proteins [BR:
vff03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
VITFI_CDS2681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
P22_Cro
HTH_20
HTH_IclR
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ASM78458
UniProt:
A0A221KHE0
LinkDB
All DBs
Position
2832124..2833146
Genome browser
AA seq
340 aa
AA seq
DB search
MPMHMLDPAGLACLAALAEGGSFERAAQLLSITQSAVSQRLRALESHVGHLLVVRARPLR
LTEPGKILLRYARQLDVLSADAAQELGACLHREARVPIAVNADSLATWVLPALDALVQAG
QRQGYALELIVDDQDFTHDWLRQGEVLGCVSTVAQALRGCDCQELGVMRYQAVASPHFLA
QHLPQGLNRGNFASTPFIVFNRKDDMQAQWVSQAFEVRGPRLLERFVPSSEAGARAAAMG
WGIAVLPELLARPAMERGELCPVLPEVGVDVMLHWHQWRLGSDSAPPPMMRHGLLDQIGR
AILQGSHAALAPATSMTRPGADNPVHDSLDRGPGQPRAGI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatgcacatgctcgatcccgccggcctggcctgcttggctgcgctggccgaaggc
ggtagttttgagcgggcggcacagttgctgagcatcacgcagtcggcggtgtctcagcgc
ttgcgggcgttggaaagccatgtcggccacctgctcgtggtgcgggctcgcccattgcgt
ttgaccgagcccggcaaaattttgttgcgctacgcccgccaactcgacgtgttgagcgcc
gacgccgcccaagaactgggcgcctgcttgcaccgcgaagcccgtgtgcctatcgccgtc
aatgccgacagcctggcaacatgggtgctgcccgctttggatgcgttggtgcaagccggg
caacgtcagggttatgcgctggagctgatcgtcgatgaccaggatttcacgcacgattgg
ctgcgccaaggcgaggttctgggctgcgtcagcaccgtggcgcaagcgttgcgcggctgc
gattgccaagagctgggcgtgatgcgctaccaggcggtggcgagcccccattttttggcc
cagcatctgccgcaaggactcaaccggggcaactttgccagcaccccgttcattgtgttc
aaccgcaaggatgacatgcaagcgcaatgggtcagccaggcgttcgaagtgcgtggcccg
cgtttgcttgagcgcttcgtgcccagcagcgaagcgggtgcccgggccgctgccatgggc
tggggcatcgccgtgctgcccgagctgctggctcgcccggccatggaacggggagagttg
tgccccgtgctgcccgaagtgggcgtcgatgtgatgttgcattggcaccagtggcgcttg
ggcagcgacagtgcgccccctccgatgatgcgccacggcttgctcgaccaaattggccgg
gccatccttcaaggatcacatgctgcgctggcacccgccacatccatgacccggccaggc
gcggataatcccgtccatgattcgcttgatcgtgggcctgggcaaccccgggccggaata
tga
DBGET
integrated database retrieval system
