KEGG   Vitreoscilla filiformis: VITFI_CDS2696
Entry
VITFI_CDS2696     CDS       T04960                                 
Name
(GenBank) WD40 repeat-containing protein
Organism
vff  Vitreoscilla filiformis
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 EIF3I WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 NNH6 eIF2A Beta-prop_EIPR1 Beta-prop_ACSF4 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd Pentapeptide TIR_2 NBCH_WD40 Tricorn_2nd NACHT Pentapeptide_4 TIR NPHP3_N AAA_22 ParD
Other DBs
NCBI-ProteinID: ASM78473
UniProt: A0A221KI16
LinkDB
Position
2841134..2845999
AA seq 1621 aa
MKLRPPQLTPFWDRLADDISPRNLARLKSLAALMGDAAQTTVAIVLAEVFASDNSAPESQ
NKAFTRLREEFNEQAQARGLTVRLEITGAKSLGGERLVWFEGEAPLHITHTTEELARVDN
RLITDNQGVPLNPEPKVHLIECAPDGRPVVRWFFSYAHADAKALSLFKRLQTALGNSPKY
QFKPWSDQHILVGEQWDAQIHAALQHSHLGVLVLSQNFLGSRYITAQELPVFVAGKHPLA
LGKRAIPVALEPIDFEHTDLKGLQAQQIFRDEDLKSFTERSGSKLTQWVNRLVAQIHKVL
ERHASVGAVVAPAPEESPRLPAAKAMQTLKWPTCHMLSGDLSGIEGRELDNHGRVTSMDK
LAQLGGDHTTAHDNTQGEDALNYLLDWASDPQAPGLFALLAEYGMGKTITCQRLIRKVEK
RREAEPTAPWPQPLYFDLRKLTGLRKREGEVPTLEQIVGECIQRGWQVAGADAGAAPSAS
ELVARSREHAQLWVFDGLDEALVHLSEVDGQAFTRELLRLQARPGSLWHPGTKLLISCRT
HFFRSLQAQNNHFTGQERDTTPASDYRALLLLPLNEEQIRTYIGHALPGLDADATLAMVK
AVHNLSELASRPYTLKLVTEFIPQIERWRAEGRPVYGVTLYRQMVQSWMHRDSGKHHLKP
EHKERLMTHLAAWMWQRGQRLIPGTELETWFLRWLKSDDDLWLRYSDVNKDKLEEDLRTA
TFLVREDEGSETEEGAPSTGGFRFAHSSMQEYFLAVHLFQAVRRNERKAWALPLVSVETR
RFLGQCLQEAAPREQAQWVQQLSTWKAPYLALASEQWLRYALEAVREGWPAPSLVGADLR
GANLHGWRFEGRQVPGAQPQVLNLSQADLSGCELRETVWADVRMEGVQLAGAALDRSEWQ
RVNAPGANLRGATLHGVRWRHVNLSGVDGAEVQGEQAWALRSVVPQGIVGWAGTSANECE
PPLEVKAPWFVQGGHSGPVNACAFSPNGLRVVSASLDNTLRLWDCASGSCLATWAGHQGW
VNACAFSPDGLRVVSASWDNTLRLWDCASGSCLATWSGHTFPVNACAFSPDGLRVVSASW
DKTLRLWDCASGSCLATWSGHQSSVNACTFSPDGLRIVSASNDKTLRLWDCALGSCLATW
SGHQSSVNACAFSPDGLRVVSASLDNTLRLWDCASGACLATWSGHQGRVSACAFSPDGLR
VISSSWDKTLRLWDCASGACLATWSGHQSSVNACAFSPDGLRVVSASLDNTLRLWDCASG
SCLATWSGHEEWGNACAFSPDGLRVVSASEDNTLRLWDCASGSCLATWSGHQSSVNACAF
SPDGLRIVSASNDKTLRLWDCALGSCLATWSGHQSSVNACAFSPDGLRVVSASWDKTLRL
WDCASGSCLATWSGHQSSVNACAFSPDGRHVVSASYDDTLRLWDCASGACLAIWSGHRGR
VNACTFSPDGLRVVSASWDKTLRLWDCASGSCLATWSGHQSSVNACTFSPDGLRVVSASD
DGTLRLWDCASGSCLATWFGHEGGVNACAFSPDGEHVISTGLDGTLRLWRVADGTQERIH
QLGRNRSHAVWEPPTNRLIEASEGAWRWLGVQERDAQGRILGVSPAEARVPGGFPYRAPS
A
NT seq 4866 nt   +upstreamnt  +downstreamnt
gtgaaactgcgcccgccccaactcaccccgttctgggatcgcctggccgatgacatcagc
ccgcgcaacctcgctcgcctgaaaagcttggccgccttgatgggcgatgcggcccaaact
accgtggccatcgtgctggccgaggtgttcgcttcggacaacagcgcgcccgagagccag
aacaaagccttcacccggctgcgggaggagttcaacgagcaggcgcaggcgcgagggctg
acggtgcgcttggagatcaccggggccaaatcgctgggtggagaacggctggtgtggttt
gagggtgaagcgccgctgcacattactcacaccacggaagagctggcgcgcgttgacaac
cggctcatcaccgacaaccaaggcgtgcccctgaaccccgaacccaaggtgcacctgatc
gagtgcgcgcccgacggtcgcccggtggtgcgctggttcttcagttacgcccatgccgac
gcgaaagcgctgagcctgttcaagcggctgcaaaccgcgctgggcaactcgcccaaatac
caattcaagccgtggagtgaccagcacatcttggtgggtgaacagtgggatgcgcagatt
cacgccgccttgcagcacagccacctgggggtgctggtgttgagccagaactttctgggc
agccgctacatcaccgcccaagagctgccggtgtttgtggccgggaagcacccgctggcc
ttgggcaagcgagcgattccggtagcgctggagcccatcgactttgagcacaccgacttg
aagggcttgcaggcgcagcagatcttccgcgatgaagacctcaagagttttaccgagcgc
agcggctccaagctgacccaatgggtgaaccgcctggtggcacaaattcacaaggtgctg
gagcgtcacgccagcgtgggcgctgtggtggcgcctgcccctgaagaatcgccgcgccta
ccagcggccaaggccatgcagacgctgaagtggccgacgtgccacatgctcagcggcgat
ctgagtggcattgaaggccgggagctggacaaccacggccgcgtcacctcgatggacaag
ctggcgcaactgggcggcgaccacacgaccgcgcacgacaacacccaaggcgaagacgcc
ctgaactacctgctggattgggccagcgacccccaagcccccggcctattcgccctgctg
gccgagtacggcatgggcaaaaccatcacctgccagcgtttgatccgcaaagtggaaaag
cggcgcgaagccgaacccaccgccccttggccgcagccgctgtactttgacctgcgcaag
ctcaccggcttgcgcaagcgagaaggtgaggtgccgacgctggagcagatcgtgggcgag
tgcatccagcgcggctggcaggtggccggcgcggacgctggcgccgcacccagcgccagc
gagctggtcgcccgcagccgcgagcacgcccagctctgggtgtttgacgggctggacgaa
gccctggtgcacctgagtgaagtggacggccaagccttcacccgcgagctgctgcgcctg
caagcccgccccggctcactctggcaccccggcaccaaactgctgatctcctgccgcacg
catttcttccgcagcttgcaggcgcaaaacaaccacttcaccggccaggagcgggacacc
accccggccagcgattaccgcgccttgctgctgctgccgctgaacgaagagcagatccgc
acctacatcggccatgcgctgccggggctggatgccgacgccacgttggcgatggtgaaa
gccgttcacaacctgagcgagctggccagccggccgtacacgctcaagctcgtcaccgag
ttcattccgcagattgaacgctggcgggccgaagggcggccggtgtacggcgtgacgctt
taccgccaaatggtgcaaagctggatgcaccgtgacagcggcaagcatcacctgaaaccc
gagcacaaagagcggctgatgacgcatctggcggcctggatgtggcaacgcgggcagcgg
ctcatcccaggaaccgagctagaaacttggtttctccgctggttgaagagtgatgacgac
ttgtggcttcgttacagcgacgtgaacaaagacaagctggaggaagacctgcgcaccgcc
actttcttggtgcgggaggatgaaggcagcgaaacggaagaaggcgcacccagcaccggc
ggcttccggtttgcgcacagctcaatgcaggaatactttttggcggtgcatttgttccag
gctgtgcggcgcaacgagcgcaaagcctgggccttgccgctggtgagtgtggaaacgcgg
cgttttctgggccagtgtttgcaggaagcggcgccgcgtgagcaggcgcagtgggtgcag
cagctctcaacctggaaggcaccttatctggctttggccagtgagcaatggctgcgctac
gcgctggaggcggtgcgtgaaggctggcccgcacccagtctggtgggtgccgatctgcgg
ggagcgaacttgcatggctggcgctttgaagggcgccaagtgccgggtgcccagccgcaa
gtgctgaacttgagccaagcggatttgagcggctgtgagctgcgggaaaccgtgtgggcg
gatgtgcgcatggaaggcgtgcaactggccggggcggcgctggatcgcagcgagtggcag
cgggtgaacgcgccgggggcgaacttgcgcggcgccacgctgcatggggtgcgctggcgg
cacgtcaatttgagtggggtggatggggcggaagtgcaaggcgaacaagcttgggcgctg
cgctcggtggtgccgcaggggatagttggctgggcgggcacttcagccaacgaatgtgaa
ccgccgcttgaagtgaaagcgccttggtttgtgcagggtgggcactcaggccctgtcaac
gcctgcgccttttccccgaatgggctgcgcgtcgtctccgcaagcttggacaacaccttg
cgcctgtgggactgcgcttcgggctcctgcctggccacctgggctggccatcaaggctgg
gtcaacgcctgcgccttttccccggatgggctgcgcgtcgtctccgcaagctgggataac
accctgcgcctgtgggactgcgcttcgggctcctgcctggccacttggtctggccataca
tttcctgtcaacgcctgcgccttttccccggatgggctgcgcgtcgtctccgcaagctgg
gacaaaaccttgcgcctttgggactgcgcttcgggctcctgcctggccacttggtctggc
catcaaagctccgtcaacgcctgcaccttttccccggatgggctgcgcatcgtctcagca
agcaacgacaaaaccttgcgcctttgggactgcgctttgggctcctgcctggccacttgg
tctggccatcaaagctccgtcaacgcctgcgccttttccccggatgggctgcgcgtcgtc
tccgcaagcttggacaacaccttgcgcctttgggactgcgcttcgggcgcctgcctcgcc
acttggtctggccatcaaggcagggtcagcgcctgcgccttttccccggatgggctgcgc
gtcatctcctcaagctgggacaaaaccttgcgcctttgggactgcgcttcgggcgcctgc
ctcgccacttggtctggccatcaaagctccgtcaacgcctgcgccttttccccggatggg
ctgcgcgtcgtctccgcaagcttggacaacaccttgcgcctttgggactgcgcttcgggc
tcctgcctcgccacttggtctggccatgaagaatggggcaatgcctgcgccttttccccg
gatgggctgcgcgtcgtctccgcaagcgaggacaacaccttgcgcctttgggactgcgct
tcgggctcctgcctggccacttggtctggccatcaaagctccgtcaacgcctgcgccttt
tccccggatgggctgcgcatcgtctcagcaagcaacgacaaaaccttgcgcctttgggac
tgcgctttgggctcctgcctggccacttggtctggccatcaaagctccgtcaacgcctgc
gccttttccccggatgggctgcgcgtcgtctccgcaagctgggacaaaaccttgcgcctt
tgggactgcgcttcgggctcctgcctcgccacttggtctggccatcaaagctccgtcaac
gcctgcgccttttccccggatgggcggcacgtcgtttccgcaagctatgacgacaccttg
cgtctttgggactgcgcttcaggcgcctgcttggccatttggtctggtcatcgaggcagg
gtcaacgcctgcaccttttccccggatgggctgcgcgtcgtctccgcaagctgggacaaa
accttgcgcctttgggactgcgcttcgggctcctgcctggccacttggtctggccatcaa
agctccgtcaacgcctgcaccttttccccggatgggctgcgcgtcgtctccgcaagcgat
gacggcaccttgcgcctttgggactgcgcttcgggctcctgcctcgccacctggtttggc
catgaaggcggcgtcaacgcctgcgccttttcaccggatggtgaacatgtcatctctacc
ggcttggacggcaccctgcgcctatggcgcgtggcagacggcacccaagagcgcatccac
caactcggccggaaccgcagccacgccgtctgggagccccccaccaaccgcctgatcgaa
gccagcgaaggcgcctggcgctggctgggcgtgcaggagcgggatgcgcaaggccgcatc
ctgggcgtcagccccgccgaagcacgggtgcccggcggcttcccctaccgtgccccatcc
gcctga

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