Vitreoscilla filiformis: VITFI_CDS2696
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Entry
VITFI_CDS2696 CDS
T04960
Name
(GenBank) WD40 repeat-containing protein
Organism
vff
Vitreoscilla filiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
EIF3I
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
NNH6
eIF2A
Beta-prop_EIPR1
Beta-prop_ACSF4
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Pentapeptide
TIR_2
NBCH_WD40
Tricorn_2nd
NACHT
Pentapeptide_4
TIR
NPHP3_N
AAA_22
ParD
Motif
Other DBs
NCBI-ProteinID:
ASM78473
UniProt:
A0A221KI16
LinkDB
All DBs
Position
2841134..2845999
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AA seq
1621 aa
AA seq
DB search
MKLRPPQLTPFWDRLADDISPRNLARLKSLAALMGDAAQTTVAIVLAEVFASDNSAPESQ
NKAFTRLREEFNEQAQARGLTVRLEITGAKSLGGERLVWFEGEAPLHITHTTEELARVDN
RLITDNQGVPLNPEPKVHLIECAPDGRPVVRWFFSYAHADAKALSLFKRLQTALGNSPKY
QFKPWSDQHILVGEQWDAQIHAALQHSHLGVLVLSQNFLGSRYITAQELPVFVAGKHPLA
LGKRAIPVALEPIDFEHTDLKGLQAQQIFRDEDLKSFTERSGSKLTQWVNRLVAQIHKVL
ERHASVGAVVAPAPEESPRLPAAKAMQTLKWPTCHMLSGDLSGIEGRELDNHGRVTSMDK
LAQLGGDHTTAHDNTQGEDALNYLLDWASDPQAPGLFALLAEYGMGKTITCQRLIRKVEK
RREAEPTAPWPQPLYFDLRKLTGLRKREGEVPTLEQIVGECIQRGWQVAGADAGAAPSAS
ELVARSREHAQLWVFDGLDEALVHLSEVDGQAFTRELLRLQARPGSLWHPGTKLLISCRT
HFFRSLQAQNNHFTGQERDTTPASDYRALLLLPLNEEQIRTYIGHALPGLDADATLAMVK
AVHNLSELASRPYTLKLVTEFIPQIERWRAEGRPVYGVTLYRQMVQSWMHRDSGKHHLKP
EHKERLMTHLAAWMWQRGQRLIPGTELETWFLRWLKSDDDLWLRYSDVNKDKLEEDLRTA
TFLVREDEGSETEEGAPSTGGFRFAHSSMQEYFLAVHLFQAVRRNERKAWALPLVSVETR
RFLGQCLQEAAPREQAQWVQQLSTWKAPYLALASEQWLRYALEAVREGWPAPSLVGADLR
GANLHGWRFEGRQVPGAQPQVLNLSQADLSGCELRETVWADVRMEGVQLAGAALDRSEWQ
RVNAPGANLRGATLHGVRWRHVNLSGVDGAEVQGEQAWALRSVVPQGIVGWAGTSANECE
PPLEVKAPWFVQGGHSGPVNACAFSPNGLRVVSASLDNTLRLWDCASGSCLATWAGHQGW
VNACAFSPDGLRVVSASWDNTLRLWDCASGSCLATWSGHTFPVNACAFSPDGLRVVSASW
DKTLRLWDCASGSCLATWSGHQSSVNACTFSPDGLRIVSASNDKTLRLWDCALGSCLATW
SGHQSSVNACAFSPDGLRVVSASLDNTLRLWDCASGACLATWSGHQGRVSACAFSPDGLR
VISSSWDKTLRLWDCASGACLATWSGHQSSVNACAFSPDGLRVVSASLDNTLRLWDCASG
SCLATWSGHEEWGNACAFSPDGLRVVSASEDNTLRLWDCASGSCLATWSGHQSSVNACAF
SPDGLRIVSASNDKTLRLWDCALGSCLATWSGHQSSVNACAFSPDGLRVVSASWDKTLRL
WDCASGSCLATWSGHQSSVNACAFSPDGRHVVSASYDDTLRLWDCASGACLAIWSGHRGR
VNACTFSPDGLRVVSASWDKTLRLWDCASGSCLATWSGHQSSVNACTFSPDGLRVVSASD
DGTLRLWDCASGSCLATWFGHEGGVNACAFSPDGEHVISTGLDGTLRLWRVADGTQERIH
QLGRNRSHAVWEPPTNRLIEASEGAWRWLGVQERDAQGRILGVSPAEARVPGGFPYRAPS
A
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgcgcccgccccaactcaccccgttctgggatcgcctggccgatgacatcagc
ccgcgcaacctcgctcgcctgaaaagcttggccgccttgatgggcgatgcggcccaaact
accgtggccatcgtgctggccgaggtgttcgcttcggacaacagcgcgcccgagagccag
aacaaagccttcacccggctgcgggaggagttcaacgagcaggcgcaggcgcgagggctg
acggtgcgcttggagatcaccggggccaaatcgctgggtggagaacggctggtgtggttt
gagggtgaagcgccgctgcacattactcacaccacggaagagctggcgcgcgttgacaac
cggctcatcaccgacaaccaaggcgtgcccctgaaccccgaacccaaggtgcacctgatc
gagtgcgcgcccgacggtcgcccggtggtgcgctggttcttcagttacgcccatgccgac
gcgaaagcgctgagcctgttcaagcggctgcaaaccgcgctgggcaactcgcccaaatac
caattcaagccgtggagtgaccagcacatcttggtgggtgaacagtgggatgcgcagatt
cacgccgccttgcagcacagccacctgggggtgctggtgttgagccagaactttctgggc
agccgctacatcaccgcccaagagctgccggtgtttgtggccgggaagcacccgctggcc
ttgggcaagcgagcgattccggtagcgctggagcccatcgactttgagcacaccgacttg
aagggcttgcaggcgcagcagatcttccgcgatgaagacctcaagagttttaccgagcgc
agcggctccaagctgacccaatgggtgaaccgcctggtggcacaaattcacaaggtgctg
gagcgtcacgccagcgtgggcgctgtggtggcgcctgcccctgaagaatcgccgcgccta
ccagcggccaaggccatgcagacgctgaagtggccgacgtgccacatgctcagcggcgat
ctgagtggcattgaaggccgggagctggacaaccacggccgcgtcacctcgatggacaag
ctggcgcaactgggcggcgaccacacgaccgcgcacgacaacacccaaggcgaagacgcc
ctgaactacctgctggattgggccagcgacccccaagcccccggcctattcgccctgctg
gccgagtacggcatgggcaaaaccatcacctgccagcgtttgatccgcaaagtggaaaag
cggcgcgaagccgaacccaccgccccttggccgcagccgctgtactttgacctgcgcaag
ctcaccggcttgcgcaagcgagaaggtgaggtgccgacgctggagcagatcgtgggcgag
tgcatccagcgcggctggcaggtggccggcgcggacgctggcgccgcacccagcgccagc
gagctggtcgcccgcagccgcgagcacgcccagctctgggtgtttgacgggctggacgaa
gccctggtgcacctgagtgaagtggacggccaagccttcacccgcgagctgctgcgcctg
caagcccgccccggctcactctggcaccccggcaccaaactgctgatctcctgccgcacg
catttcttccgcagcttgcaggcgcaaaacaaccacttcaccggccaggagcgggacacc
accccggccagcgattaccgcgccttgctgctgctgccgctgaacgaagagcagatccgc
acctacatcggccatgcgctgccggggctggatgccgacgccacgttggcgatggtgaaa
gccgttcacaacctgagcgagctggccagccggccgtacacgctcaagctcgtcaccgag
ttcattccgcagattgaacgctggcgggccgaagggcggccggtgtacggcgtgacgctt
taccgccaaatggtgcaaagctggatgcaccgtgacagcggcaagcatcacctgaaaccc
gagcacaaagagcggctgatgacgcatctggcggcctggatgtggcaacgcgggcagcgg
ctcatcccaggaaccgagctagaaacttggtttctccgctggttgaagagtgatgacgac
ttgtggcttcgttacagcgacgtgaacaaagacaagctggaggaagacctgcgcaccgcc
actttcttggtgcgggaggatgaaggcagcgaaacggaagaaggcgcacccagcaccggc
ggcttccggtttgcgcacagctcaatgcaggaatactttttggcggtgcatttgttccag
gctgtgcggcgcaacgagcgcaaagcctgggccttgccgctggtgagtgtggaaacgcgg
cgttttctgggccagtgtttgcaggaagcggcgccgcgtgagcaggcgcagtgggtgcag
cagctctcaacctggaaggcaccttatctggctttggccagtgagcaatggctgcgctac
gcgctggaggcggtgcgtgaaggctggcccgcacccagtctggtgggtgccgatctgcgg
ggagcgaacttgcatggctggcgctttgaagggcgccaagtgccgggtgcccagccgcaa
gtgctgaacttgagccaagcggatttgagcggctgtgagctgcgggaaaccgtgtgggcg
gatgtgcgcatggaaggcgtgcaactggccggggcggcgctggatcgcagcgagtggcag
cgggtgaacgcgccgggggcgaacttgcgcggcgccacgctgcatggggtgcgctggcgg
cacgtcaatttgagtggggtggatggggcggaagtgcaaggcgaacaagcttgggcgctg
cgctcggtggtgccgcaggggatagttggctgggcgggcacttcagccaacgaatgtgaa
ccgccgcttgaagtgaaagcgccttggtttgtgcagggtgggcactcaggccctgtcaac
gcctgcgccttttccccgaatgggctgcgcgtcgtctccgcaagcttggacaacaccttg
cgcctgtgggactgcgcttcgggctcctgcctggccacctgggctggccatcaaggctgg
gtcaacgcctgcgccttttccccggatgggctgcgcgtcgtctccgcaagctgggataac
accctgcgcctgtgggactgcgcttcgggctcctgcctggccacttggtctggccataca
tttcctgtcaacgcctgcgccttttccccggatgggctgcgcgtcgtctccgcaagctgg
gacaaaaccttgcgcctttgggactgcgcttcgggctcctgcctggccacttggtctggc
catcaaagctccgtcaacgcctgcaccttttccccggatgggctgcgcatcgtctcagca
agcaacgacaaaaccttgcgcctttgggactgcgctttgggctcctgcctggccacttgg
tctggccatcaaagctccgtcaacgcctgcgccttttccccggatgggctgcgcgtcgtc
tccgcaagcttggacaacaccttgcgcctttgggactgcgcttcgggcgcctgcctcgcc
acttggtctggccatcaaggcagggtcagcgcctgcgccttttccccggatgggctgcgc
gtcatctcctcaagctgggacaaaaccttgcgcctttgggactgcgcttcgggcgcctgc
ctcgccacttggtctggccatcaaagctccgtcaacgcctgcgccttttccccggatggg
ctgcgcgtcgtctccgcaagcttggacaacaccttgcgcctttgggactgcgcttcgggc
tcctgcctcgccacttggtctggccatgaagaatggggcaatgcctgcgccttttccccg
gatgggctgcgcgtcgtctccgcaagcgaggacaacaccttgcgcctttgggactgcgct
tcgggctcctgcctggccacttggtctggccatcaaagctccgtcaacgcctgcgccttt
tccccggatgggctgcgcatcgtctcagcaagcaacgacaaaaccttgcgcctttgggac
tgcgctttgggctcctgcctggccacttggtctggccatcaaagctccgtcaacgcctgc
gccttttccccggatgggctgcgcgtcgtctccgcaagctgggacaaaaccttgcgcctt
tgggactgcgcttcgggctcctgcctcgccacttggtctggccatcaaagctccgtcaac
gcctgcgccttttccccggatgggcggcacgtcgtttccgcaagctatgacgacaccttg
cgtctttgggactgcgcttcaggcgcctgcttggccatttggtctggtcatcgaggcagg
gtcaacgcctgcaccttttccccggatgggctgcgcgtcgtctccgcaagctgggacaaa
accttgcgcctttgggactgcgcttcgggctcctgcctggccacttggtctggccatcaa
agctccgtcaacgcctgcaccttttccccggatgggctgcgcgtcgtctccgcaagcgat
gacggcaccttgcgcctttgggactgcgcttcgggctcctgcctcgccacctggtttggc
catgaaggcggcgtcaacgcctgcgccttttcaccggatggtgaacatgtcatctctacc
ggcttggacggcaccctgcgcctatggcgcgtggcagacggcacccaagagcgcatccac
caactcggccggaaccgcagccacgccgtctgggagccccccaccaaccgcctgatcgaa
gccagcgaaggcgcctggcgctggctgggcgtgcaggagcgggatgcgcaaggccgcatc
ctgggcgtcagccccgccgaagcacgggtgcccggcggcttcccctaccgtgccccatcc
gcctga
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