Vitreoscilla filiformis: VITFI_CDS2772
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Entry
VITFI_CDS2772 CDS
T04960
Name
(GenBank) DNA helicase
Organism
vff
Vitreoscilla filiformis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTES_1575
AAA_11
AAA_12
AAA_30
AAA_19
DUF559
nSTAND3
UvrD-helicase
AAA_25
NPHP3_N
MeaB
IstB_IS21
AAA_22
ResIII
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ASM78549
UniProt:
A0A221KI00
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All DBs
Position
2917192..2921736
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AA seq
1514 aa
AA seq
DB search
MSHSAQRLARLLDQVIEQARDTDPQHFHLGRHAHWLKSPAQLQGLSGLSVAPSLSAGEPV
WLRLERPDPEPLPAPGLEEQLVGLIHTQDDPDGPPPHLDEVMLARRLALTVTDRSDDAVQ
RIETRVSVWVSQALADHLAAWTQWADAERARRRSVALYSELFALKQQIEATQTTQALELV
WGLGVSAWQLPTKPDKSTSAVQYPLITQALEVVLEEGSLALLLRPRTLAPRLAFDVWGSA
GLPMARETERRALEALAACEPGLHPSTPGAFESVWRVVAGTLHERGRYLPTPAGGVPVWP
EPGPDLHVSDAWVLLARPRSNSYLHEDIQRLKDQLASLETMPEGVDALVTPSQDRLAASE
PLTLRGRSGLTRPPQGPAGLVHELFFPLPYNSEQVSIVDWLERSHGVAVQGPPGTGKTHT
IANIVCHYLARGRRVLVSAKGDRALEVLQSKIPAPVRPLTVAVLAGDREGLRQFRSAIEA
ITHTVTQLHPDEVRARLHQAHSDIHRAHSELALLDRRIAAIAQQQLSDVEFEGDRWRPQR
MAEHVAQGEARYAWWTDRPTLAPEHAPPLSALEVARLREVRRALGPDMVRVATGIPSCQD
LPAADDVGAMHQALLTLHQLAQDTAQGDLPALLDTSAATLSAAQTLRDLLADAQPQVLAL
ERAEQAWPVQVRQRCAQAGLSSERTALLALLDDLAVLTRERAAFLRLPVVLPPQDALSPA
LREVLERAASTGRPFGRFNLGAAELKARVAHIRVAGLAPVTPADWAHTVRCQRLHERCVM
FRARWQAIAPALGLPELPSDAPTLLGEIDVIAAALRPALALSESLDAVLPLRLAEVFAPV
PALPPSVGSTDIARLLRALDRHLAGAELSRAQAQHDSLRQRIAQAPEGPLRQAWHDWFAQ
QLGQPGVPVDVAVAQYVELLGAWRRLEALLPAYATLEALTTRIAEAGAPQWAARLRQACT
ERQGDDPQVPADWREAWQWARLRTHVDGIDAHAELAQLTQQRQALEHTLARRYEDVVAQS
AWLAMRVNASPKVLSALARYQTAVRLIGKGTGAHALRHRQDAQQAMQEAQSAVPCWIMSH
ARVSEMLPAQIGSFDLVIVDEASQSDLWALPVLLRGRKLLIVGDDKQVSPEAGGFLAASR
VQALRERFLVDQPHAAVLTPLHSLYDMASSVFAASKVMLREHFRCAAPIIAYSNHTFYDG
AIQPLRVPTASERLDPPLIDLFVPSGRRDGRDINHDEAQAIADEIAAVLADPRCAGRSLG
VISLLGFEQARYIDHLVRTRCDAAELQRRQFECGDARQFQGSERDILFLSLVVSPGACKA
LSGNVFEQRFNVATSRARDRMVLVRSVTMADLSPLDLRQGLLAHFSADTCAAPSPHGDDA
HAALRALCESGFEREVLDALLTRGYHVQPQVRVGSYRIDLVVEGESDRRLAVECDGDEFH
GPDRWAADMQRQRVLERAGWVFWRCFASTWHRRQAQVIADLEHTLQHHGIQPLGRQRQLG
RVLEQRVWQPPGLA
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgagtcattccgcccagcgcctggcgcgtctgctcgatcaagtgatcgaacaggcccgg
gacaccgatccgcagcatttccaccttggccgccacgcccactggctgaaatcccccgct
caattgcaaggtctgtccggcctcagcgtggcgcccagtctcagcgccggtgagccggtg
tggttgcgcctcgaacgccccgaccccgagcccttgcccgcccctgggctggaagaacaa
ctcgtcggcctgatccacacgcaagacgacccagacggccccccgccgcatctggacgag
gtcatgctggcccgtcgcctggccctgaccgtgacggatcgctccgacgacgcggtgcag
cgcattgaaacccgcgtcagcgtgtgggtgagccaagcgctggccgaccatctggccgcc
tggacgcaatgggccgacgccgaacgggcccgccggcgcagtgtggcgctgtacagcgag
ctgttcgcgctcaagcagcaaattgaagccacgcaaaccacccaggcgctggaattggtg
tggggcttgggcgtcagcgcctggcagttgcccaccaagccggacaaatccacctccgcc
gtgcaataccccctcatcacccaagcgctggaagtggtgttggaggaaggcagcttggcg
ctgctgctgcgcccgcgcaccctggcgccgcgtttggcgtttgatgtgtggggcagtgcc
ggcctgccgatggcccgagaaaccgaacgccgcgccttggaagccctggccgcttgcgaa
ccgggtttgcatccgagcacgcccggcgcgttcgaaagcgtgtggcgggtggtggctggc
acgctgcacgagcgggggcgctacctaccgacccccgctggcggtgtgcccgtgtggccc
gaaccggggccggatctgcacgtcagcgacgcctgggtgttgctggcccgcccgcgctcg
aacagttatttgcacgaggacatccagcgcctcaaagatcaactggccagcctggagacg
atgcccgaaggggtcgatgccctggtgacgccctcgcaagatcggctcgccgcctccgaa
ccgctgacgctgcgcggacgctctggcctgacccgcccgccccaagggcccgccgggctg
gtgcatgagctgtttttcccgctgccctacaacagcgagcaagtcagcatcgtggattgg
ctggagcgcagccacggcgtggctgtgcaaggcccgcctggcacgggcaaaacgcacacc
atcgccaacatcgtctgccactacctggcgcgggggcgacgggtgctggtgtcggccaaa
ggggatcgggcgctggaggtgctgcaatccaaaatccccgccccggtgcggcccctgacg
gtggcagtgctggccggtgatcgcgaggggctgcggcagtttcgcagcgccattgaggcc
atcacccacaccgtcacgcagttgcatccggatgaagtgcgggcccggctgcaccaagct
cacagcgacatccaccgcgcccacagcgagctggctttgctggatcggcgcattgctgcc
atcgcccagcaacagctcagtgacgtcgagtttgagggcgatcgctggcgcccgcagcgc
atggccgagcacgtcgcccaaggggaagcgcgctacgcctggtggacggatcgccccacc
ctcgcccccgaacacgcgccccccttgagtgcgttggaggtggcccgcctgcgcgaagtg
cgccgggcgctggggccggacatggtgcgcgtcgccactggcatcccgagttgccaagac
ttgcccgctgccgacgacgtcggcgccatgcaccaagccctgctcaccctgcaccaactg
gcacaagacaccgcccaaggcgacctgcccgccctgctcgacaccagtgccgccaccttg
agcgccgcgcaaacgctgcgcgatctgctggccgatgcccagccgcaggtgctggcgctg
gagcgggccgaacaagcgtggccggtacaggtgcgccaacgctgcgcgcaagcgggtttg
tccagcgaacgcacggccttgctggcgctgctggacgatttggcggtgttgacgcgtgaa
cgcgccgcctttttgcgcctgcctgtggttttgccaccgcaggacgcgctcagcccggcc
ttgcgtgaggtgctagagcgggccgccagcacggggcggccttttgggcgcttcaacctg
ggggcggcggaactcaaagcgcgggtggcgcacatccgcgtggccgggctggcgccggtg
acgccggcagattgggcgcacaccgtgcgctgccagcgcctgcacgaacgctgtgtgatg
ttccgtgcccgttggcaggccatcgccccggccttgggcctaccagaattgccctcggat
gcgcccaccttgctgggggagatcgacgtcatcgcagcggcgctgcgtccggcgttggcg
ctgtccgagtccttggatgcggtcttgccgctgcgtttggccgaggtgttcgcccccgtg
ccggcgctgccgcccagcgtgggcagcacagacatcgcccgcctcctgcgtgccttggat
cgacatctggccggcgccgaactgagccgcgcccaagcccagcacgacagcctgcgccag
cgcatcgcccaagcgccagaaggcccgctgcgccaagcgtggcacgactggtttgcgcag
cagcttggccaaccgggcgtgccggtggatgtggccgtggcgcagtacgtcgaattgctg
ggcgcttggcgacgtttggaggctttgctgcccgcctacgccaccttggaagccctgacg
acgcgcattgccgaagcgggcgcaccgcaatgggcggcgcggttgcgccaagcctgcacg
gagcgccaaggcgatgacccgcaggtgcccgccgactggcgtgaagcctggcaatgggcc
cggctgcgcacgcatgtggacggcatcgacgcccacgccgaattggcacagctcacccaa
cagcgccaagccttggaacacaccttggcgcggcgctacgaggacgtggtggcccaatcg
gcgtggctggcgatgcgggtcaatgcatcgcccaaggtgttgagcgcactggcgcgttac
cagaccgctgtgcgcctcatcggcaagggcacgggcgcacatgcgctgcgccaccgccag
gacgcccaacaggccatgcaagaagcccaatccgccgtgccgtgctggatcatgagccac
gcccgcgtctcggaaatgctgccggcgcagatcggcagtttcgatttggtgatcgtggac
gaggccagccagtccgacctgtgggcgctgccggtgctgttgcgcgggcgcaaactgttg
atcgtcggggatgacaaacaggtctccccagaagccggaggctttttggcggcctcgcgg
gtgcaagcgctgcgcgagcgcttcttggtggatcagccgcacgcggcggtgctcaccccg
ttgcactcgctttacgacatggcctcctcggtgttcgccgccagcaaggtgatgctgcgt
gaacacttccgctgtgccgcacccatcattgcctacagcaaccacacgttttacgacggc
gccatccaaccgctgcgcgtgcccaccgccagcgagcgtttggatccgccgctgatcgac
ctgttcgtgccctcgggccggcgcgatggccgcgacatcaaccacgacgaagcccaagcc
atcgccgatgaaatcgccgccgtgctggccgatccgcgttgtgctgggcgcagcctcggg
gtcatttcgctgctgggcttcgagcaagcgcgctacatcgaccacctcgtgcgcacccgt
tgcgatgccgccgaattgcagcgccgccagttcgaatgcggcgatgcccgccaattccag
ggcagcgagcgcgacatcctctttttgagtttggtggtgtcgccgggggcgtgcaaggcc
ttgtcgggcaatgtgtttgagcaacgcttcaacgtcgccaccagccgtgcgcgggatcgg
atggtgctggtgcgttcggtgacgatggcggatttgtcccccctcgatttgcgccaaggc
ttgctggcacatttcagcgccgacacttgtgcagccccgagcccccacggggacgatgcc
catgccgcgttgcgggccttgtgtgaatcgggattcgaacgtgaagtgctggacgctctg
ttaacacgcggttaccacgtacagccacaagtgcgtgtgggtagctatcggatcgacttg
gtggtcgaaggtgaaagcgaccggcgtttggcggtggaatgcgacggtgacgaattccac
ggccccgaccgttgggcagccgacatgcaacgccagcgcgtgctggagcgagccggttgg
gtgttttggcgctgctttgcttcgacatggcaccggcgccaagcccaggtgatcgccgac
ttggagcacaccttgcagcatcacggcatccagcctttggggcgacaacgccagctcggg
cgtgtattggagcagcgcgtatggcagccgcctgggttggcatga
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