Vitreoscilla filiformis: VITFI_CDS2934
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Entry
VITFI_CDS2934 CDS
T04960
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vff03016
]
VITFI_CDS2934
Enzymes [BR:
vff01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VITFI_CDS2934
Transfer RNA biogenesis [BR:
vff03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VITFI_CDS2934
Prokaryotic type
VITFI_CDS2934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ASM78711
UniProt:
A0A221KI48
LinkDB
All DBs
Position
complement(3084301..3085071)
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AA seq
256 aa
AA seq
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MGVSYVGHAYHGWQSQPSGRTVQDHLERALAQFAAQPIHTLCAGRTDTGVHGLNQVVHFD
TPVQRELFSWVRGTNRYLPPDIAVQWCREVPRRFHARNSARARRYAYVLLESPVRPALEA
GRCGWVFRPLDGSAMQAAADRLIGEHDFSSFRSAECQALSPIKQMRRLEVSRRGAYWRFD
FEASAFLHHMVRNIMGCLVAVGTGARAPHWMGDVLAARSRDAAAPTFMPDGLYFLGPVYD
AELDLPTHVPTHDWLP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
ttgggggtgagttacgtcgggcacgcttaccacggctggcaaagccaacccagcgggcgc
acggttcaggatcacctggagcgtgcgctcgcacagtttgcggcccagccgatccacact
ttgtgcgcaggccgcactgacacgggcgttcacggcctcaaccaagtcgtgcatttcgac
acgcccgtgcagcgcgagttgttttcctgggtgcgcggcaccaaccgctatttgccgccg
gacatcgccgtgcagtggtgccgcgaagtacctcggcgctttcatgcccgtaacagcgca
cgggcccggcgttatgcctacgtgttgctcgaatcccccgtgcggccagcgctggaggcg
gggcgctgcggttgggtgttccgcccgctggacggatcggcgatgcaggcagcagccgac
cgcttgatcggtgaacacgatttcagctcgtttcgctcggcagaatgccaggccctgtcg
cccatcaagcagatgcggcgcctggaggtgtcccggcgcggggcgtactggcgcttcgac
ttcgaagccagcgcttttttacaccacatggtccgcaacatcatgggatgcttggtggcg
gtgggcaccggcgcacgggcaccgcactggatgggcgacgtgctggctgcccgcagccgc
gatgcggcggccccgaccttcatgcccgatggcctgtattttctcggcccggtctacgat
gctgaactggatttgccaacgcacgtcccaacgcacgattggctgccctga
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