Vitreoscilla filiformis: VITFI_CDS3068
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Entry
VITFI_CDS3068 CDS
T04960
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vff
Vitreoscilla filiformis
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vff03400
]
VITFI_CDS3068
Enzymes [BR:
vff01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VITFI_CDS3068
DNA repair and recombination proteins [BR:
vff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VITFI_CDS3068
Prokaryotic type
VITFI_CDS3068
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
PGM_PMM_II
Motif
Other DBs
NCBI-ProteinID:
ASM78845
UniProt:
A0A221KIQ4
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Position
3243604..3245103
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AA seq
499 aa
AA seq
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MPSQPFQRALVWLRRDLRADDHAALAAACTQADQVWCAFVFDTPLLDPLPRRDRRVAFIH
HSLTQLDAELDALGQRHGHAPGAVRLIVQHGVATEVIPALARQLRADLVCLNHDDEPDAL
RRDAQVREHLHAAGIVCQSFKDHVLFERSEVLTGANRPYSVFTPYKNAWLKRLRAHPEAM
APHAVAPHALALAPWPEDLGTPGIPPLAALGFEPIDDTLLRLPCGSAGARTLLADFLPRI
DGYADKRDFPACKGPSYLSVHLRFGTVSIRELVREAWGRGAADNAPGPATWLSELIWRDF
YHQILHHNPHVVGQAFKLEFDSVCWEEGPEADALFDAWCHGRTGYPLVDAGMRQLWQTGY
MHNRLRMVVASFLTKDLGVDWRRGEAWFALHLNDFDLAANNGGWQWAASTGCDAQPWFRI
FNPVTQSEKFDPQGRFIRRYVPELAKLDDRSLHAPWLAPALSLAAAGVRLGTDYPHPVVD
HDAARQRTLARFGSLKPGR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccaaccgtttcaacgtgccctggtctggttgcgccgcgatctgcgggcggac
gaccacgccgccctggccgccgcgtgtacccaagccgatcaggtgtggtgcgctttcgtc
ttcgacaccccccttctcgacccgctgccgcgccgggatcggcgtgtcgccttcattcac
cacagcctgacgcaactcgacgccgagttggacgcgctaggccaacgccacggccacgcg
cccggggcggtgcggctgatcgtgcagcacggcgtcgccaccgaggtcatcccggcattg
gcgcggcaactgcgggccgatctggtctgcttgaaccacgacgatgaacccgatgcgctg
cgccgcgacgcccaggtgcgcgagcacctgcacgcagcgggcatcgtttgccaaagcttc
aaagaccatgtgctgttcgagcgcagcgaagtgctgaccggcgcaaaccgcccttacagc
gtgttcacaccctacaaaaacgcttggttgaagcgcctgcgcgcccaccccgaagcgatg
gcgccgcacgcggtcgccccgcacgcgctggccttggcgccgtggcccgaagatttgggc
acgccgggcatcccgccgctggcggcgctggggttcgagccgatcgacgacaccctgttg
cgcttgccctgcggcagcgcgggcgctcgcaccctgctggcggatttcctcccccgcatc
gacggctatgccgacaagcgcgatttcccagcctgcaaaggcccgagttacctcagcgtg
catctgcgttttggtacggtgtccatccgcgaattggtgcgcgaggcttgggggcgcggt
gcggctgacaacgcgccagggccagcgacgtggttatcggagctgatttggcgggacttc
tatcaccaaatcttgcaccacaacccgcacgtcgtcggccaggctttcaagctggaattc
gacagcgtgtgctgggaagaaggccccgaagccgatgcgctgttcgacgcttggtgccac
gggcgcactggttatccgctggtggatgcgggcatgcgccagctctggcaaaccggctac
atgcacaaccggctgcgcatggtggtggccagttttctcaccaaagatttaggcgtcgat
tggcgccggggcgaagcatggttcgcgctgcacctgaacgattttgacctggctgccaac
aacggcggttggcagtgggccgcttcgactgggtgtgatgcacaaccctggtttcgcatc
ttcaaccccgtgacgcaaagcgaaaaattcgatccacaaggccgattcattcgccgctat
gtgcccgaactggccaagctggacgaccgcagtctgcacgcgccatggctggcccccgcc
ctgagtttggccgccgccggggtgcggttgggcacggattacccgcatcccgtggtcgat
cacgacgcggcccggcaacgcactctggcccgcttcggctcgctcaaacccgggcgctga
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