Vitreoscilla filiformis: VITFI_CDS3111
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Entry
VITFI_CDS3111 CDS
T04960
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vff
Vitreoscilla filiformis
Pathway
vff03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VITFI_CDS3111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vff03019
]
VITFI_CDS3111
Messenger RNA biogenesis [BR:
vff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VITFI_CDS3111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
ASM78888
UniProt:
A0A221KIL2
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All DBs
Position
3297505..3298143
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AA seq
212 aa
AA seq
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MLDRDGYRPNVGIILLNSRNQVFWGKRLRTHSWQFPQGGIKYGESPEQAMLRELHEEVGL
HPEHVEILARTRDWLRYDVPDHFIRKDARGHYKGQKQIWFLLRLLGRDSDMNLRATNHPE
FDAWRWNEYWVPLDVVIEFKRGVYQMALTELARFLPRLHHHNRFLRSGMRAGPREPRSHY
GDMLHEHEPHAEPEPELAGSEELRPAPGYRGE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgctagaccgggacggctaccggcccaacgtcggcatcatcctgctcaactcccgcaac
caggtgttctggggcaagcgtctgcgcacccactcctggcagttcccgcaagggggcatc
aaatacggcgagtcgcccgagcaggcgatgctgcgtgagcttcacgaagaagtgggcttg
catcctgagcacgtggagatcctggcgcgcacccgcgactggctgcgctacgacgtgcct
gaccatttcatccgcaaagacgcacgcggccactacaagggccaaaagcagatctggttc
ttgctgcgcctgctggggcgggacagtgacatgaacctgcgcgccaccaaccaccccgag
ttcgacgcctggcgctggaacgaatactgggtgccgctggatgtggtgatcgagttcaaa
cgcggcgtttaccaaatggcactcaccgagctggcgcgcttcctgccgcgcctgcatcac
cacaaccgctttttgcgcagcggcatgcgtgcggggccgcgtgagccccgttcccattac
ggagacatgctgcacgagcacgagccccacgccgaacccgagccagagctggccggctcc
gaggaactcaggccagcaccaggttatcgcggtgaatga
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