Vitreoscilla filiformis: VITFI_CDS3494
Help
Entry
VITFI_CDS3494 CDS
T04960
Name
(GenBank) hypothetical protein
Organism
vff
Vitreoscilla filiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
HCBP_related
Motif
Other DBs
NCBI-ProteinID:
ASM79271
UniProt:
A0A221KJQ1
LinkDB
All DBs
Position
pVF1:complement(261334..269259)
Genome browser
AA seq
2641 aa
AA seq
DB search
MADFNGTSGNDNLTGTSGDDSLRGLEGDDSLVGGSGNDILRGGVGNDTLVGGAGNDTYYV
DSLLDVVTELSGEGTDLVYSSVSHTLGANLENLTLTGSVGLAGTGNSLNNVITGNTGNST
LSGLAGNDTLISSTGTDTLIGGTGDDAYTINNSADVVVEDAAAGTDTVTTSISYTLSDNV
ENLVLAVGGLSGTGNALANAITGSSGNNTVYGLAGNDVLDGGDGNDSLVGDADNDTLNGS
AGADTLRGGTGNDSLTGGIGNDSVIGGDGNDVLNGSAGVDTLVGSLGNDTYYVDSATDVT
VESLDSGTDGVVSSAAAYTLSDNVENLVLAVGGQSGTGNGLANVITGSTGNNTMFGLAGS
DTLDGGAGNDSLQGGDGTDSLSGAAGDDTLIGGAGADTLDGGAGNDSLLGETENDTLYGA
AGADTLHGGKGSDSLVGGDGNDSLSGGADDDTLDGSAGTDTLVGSTGNDTYYVDSATDVI
TEALNEGTDSVISTATAYTLAVNVEKLTLSGTANLSGTGNALDNTFFGNVGDNTLVGNDG
HDTFHAGAGADYMVGGNGNDSYAVDQLGDTVIEAAGANTGTDTVLATISYTLGSNFENLV
LGTGSNLSAVGNSSNNAITGNETNNFIDGKAGSDTLTGGAGDDTYAVDASGDVVIENASE
GTDQVNSSVSYTLGANIENVTLTGTSNLNVTGNTGNNVITGNSGANLLSGGTGTDVFTGG
AGHDTYVVDSADDVVTEDLNAGTDQINTSVNYTLSANVERLLVLGTVGLLGTGNALDNHL
TGASGNDTLLGGDGSDTLLGLTGNDVLRGGDGDDFYRVDAAGDSVVEAAAEGTDTIQASV
SYTLGDNIENLTLIGTENVNATGNELVNILKGNVGNNLLDGDVGADAMAGGDGNDTYVVD
DVGDTTSELAGGGTDEVQVSMDWTLASQVENLVLRGTNLVGTGNELNNVITGDAGSDTLD
GGTGADTLVGGGGNDSYVVNSSTDSVTEAASSGNDTVSASVSYTLGANIENLLLSGSSDL
NGTGNADGNLIRGTSSSNLLDGAAGADTLEGGDGDDTYVVDHASDTVTEALDAGTDEVHA
SLDWTLSANVENLLLTGSTDIDGTGNALDNLITGNTAGNLLDGGSAGDDTLVGGTGNDTY
VAGTGNVTIIEWAGEGTDWVQSAASYTLAATLENLTLTGTSTIDGTGNAANNIIQGNSAA
NRLDGLKGNDTLTGGAGNDTYHVDSAGDVITENTNEGTDWVEAEFNYTLSSNLENLTLVD
NGYNLSGTGNDLNNSITGNGADNWLDGGVGQDSLVGGVGHDTYVIDDVGDVITEEVSEGT
DEVRSAINYTLGTNLENLTLTGTGNLTGTGNTQGNVITGNTGNNTLDGGTGNDSFAGGVG
NDVYIVDAALDVISELGGEGTDEARSSVSYTLAAQVENLVLTGTGNINGTGNTQANSITG
NAGDNSLNGVSGADALTGGDGNDTYVVNSADDVVTEVLDEGTDLVESSVDWTLGANLEDL
VLTGTGDIDGTGNALDNAIDGNSGDNSLDGAAGQDSLVGGAGNDTYVVDDAADEVTENAS
EGTDEVQSSVSYTLGAELENLTLTGTANIDGIGNTLDNIIIGNAGNNALDGDTGADSLAG
GAGNDTYTVNSSTDVVTEAAASGQDLVNSSVSWALGENFEDLTLTGTDNINGTGNALNNV
ITGNTGNNSLSGGVGIDSLLGGDGNDTYVVDEAGDTLTETAGTDEVQSSVSWTLAADFEN
LVLTGTANINGTGNTSGNEIDGNSGNNSLDGAAGADSLAGGAGNDTYVVDNVGDGVTENL
DAGTDEVKSSVDYTLGANVENLTLTGADNINGTGNALNNIIVGNTGNNALNGDIGADSLA
GGGGNDTYTVNSSTDVVTEAVTSGQDLVNSSVSWTLGDNVEDLTLTGTDNINGTGNALNN
VITGNTGNNSLSGGVGIDSLLGGDGNDTYVVDNAGDTLTETVGTDEVQSSVNWTLAADFE
NLVLTGTANINGTGNTGGNRIDGNSGNNSLDGAAGADSLAGGAGNDTYVVDDAGDGVTEN
LDAGTDEVKSSIAYTLGANVENLTLTGADNINGTGNVLNNIIVGNTGNNALNGDSGADSL
AGGAGNDTYTVNSSTDVVTEAVTSGQDLVNSSVSWTLGDNVEDLTLTGTDNINGTGNALN
NVITGNTGHNILTGGAGTDTLDGGTGNDTYIVDGGETVTEASGAGTDQVTSTVTWTLAAN
VENLVLYGANAAGDSAINGFGNTLNNEIIGNGAANYLDGGSGADTLKGRLGNDTYVVDST
GDTLVEGNTLGGTDLVLASVTWALGTNFENLTLTGTADINGAGNSVNNVVTGNTGDNKLS
GAAGNDTVVGGDGDDTLQGGTGTDALDGGVGNDVIYTGTAGGDNAADVLVFGEGDGNDTV
YAYANSEGAADAIGLDSTVSVNELVVSRSGDDLVLGLTSTSDTLNVKNFFSYSASDEFTV
GTIGFATDSTATLTYQDILAQSLIGTGGDDVLIGYATDDEIIGNAGNDTLHGNGGADTLT
GGEDNDAIYSGTVSEVDNESDTIVYAVGDGDDIIYTYASSLATADVIQLGAGITAANLSA
SQDGLDLVLDIGGTGTLTIDGFFEQKQVGAYTVGSIELDDGTTLAVADILALIGDTAVPI
V
NT seq
7926 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcaacggcacgtccggcaatgacaacctgacaggcacctctggcgatgac
tcccttcggggtttggagggcgatgactcgctcgtcggcggttctggcaacgacatcctg
cgcgggggggtcgggaatgacaccttggtgggtggagccggcaatgacacgtactacgtc
gactctctgctggacgtcgtcaccgagctgtcaggtgaaggaaccgacctcgtttattcc
agcgttagccatacgcttggcgccaaccttgaaaacctgacgctcaccggttcggtcggt
ttggccggcaccggcaacagcctgaacaacgtcatcacgggcaacacgggcaacagcacg
ctgtcgggtttggcgggcaatgacacgctgatcagcagcaccggcactgacacgctcatc
ggtggtacaggtgacgacgcctacaccatcaacaacagcgccgatgtggtggtggaagat
gctgcggcaggcacggacaccgtgaccaccagcatcagctacaccctgtcagacaacgtt
gagaacttggtattggccgttggtggtttgtctggcaccggcaatgcgctggccaacgcc
atcaccggcagctccggcaacaacaccgtgtacggcctagcaggcaacgacgtgctggat
ggcggtgacggcaatgactcgctggtgggggacgctgacaacgacaccctgaacggctcc
gccggtgctgacaccctgcgcggcgggacgggcaatgactccctcaccggcggcattggc
aacgactccgttatcggtggggacggcaatgatgtgctgaatggttctgcgggcgtcgat
accctggtgggtagtctcggtaatgacacatactatgtggacagtgccaccgacgttacc
gtagagtccctggacagtggcaccgatggcgtggtctcctccgctgcggcgtacacgctg
tctgacaatgttgaaaacttggtgctggccgttggcggccagtctggtacaggcaacggc
ctggccaacgtcatcacgggcagcacaggcaacaacaccatgtttggcctggcaggcagc
gatacgctggatggcggagccggcaatgattctttgcagggcggggatggcaccgacagt
ttgtcgggtgcggccggtgacgatacgctgatcggcggagctggtgctgacacgctggat
ggcggtgctggtaatgactctttgctcggggaaactgagaacgacacgctgtacggtgct
gctggcgccgataccctgcacgggggcaaagggagtgactcgttggtcggcggtgatggc
aacgactccctctcgggcggtgccgatgatgacacgctggacggctctgccggtaccgac
accctggtgggtagcacgggcaatgacacgtactacgtcgatagtgccactgacgtcatc
acagaagccctgaacgaaggcactgacagtgtgatctcgaccgcaacggcgtacaccctg
gcggtcaacgtcgagaagctcaccctgtcgggcactgctaacctgtcgggcacgggcaac
gcactggacaacactttcttcggcaacgtcggtgacaacacgctggtgggtaacgacggc
catgacaccttccacgccggcgctggtgccgactacatggtaggcggcaacggcaatgac
agctatgcggtcgatcagctcggagacaccgtcattgaggccgccggtgcgaacacgggc
actgacacggttctcgccaccatcagctacacgttgggcagcaacttcgaaaatctggtg
ctcggtaccggctcgaacttgtcggcggttggcaacagctcgaacaatgccatcactggc
aacgaaaccaacaacttcattgatggcaaggcgggtagcgacaccctcaccggcggtgca
ggcgatgacacgtatgcggtcgatgcctcgggggatgtggtcatcgaaaatgcgagcgaa
ggcactgaccaagtgaactcgtcggtgtcctacaccctgggcgccaacatcgaaaacgtg
accctcactggcacgagcaacctgaacgttaccggaaacaccgggaacaacgtcatcacg
ggcaactcgggggccaacttgttgtcgggtggcactggcaccgacgtgttcacaggtggt
gcaggtcatgacacctatgtggtggactcggccgatgacgtggtcacggaagacctcaat
gcgggtacggatcagatcaacacttcggtgaattacacgttgtccgccaacgtggaaagg
ctgctggtactgggcactgtcggcctgttgggaactgggaacgcactggataaccacctc
accggtgcctcgggcaacgataccctcctgggtggtgacggcagcgacaccctgcttggt
ttgacaggcaatgatgtcttgcgtggtggcgatggtgatgacttctaccgggtcgatgct
gctggggacagcgtcgtcgaagcggctgccgaaggcaccgacacgattcaagcaagcgtg
tcctacacactcggcgacaacatcgaaaacctgacgctcatcgggaccgagaacgtgaat
gctaccggcaatgagctggtcaacattctgaagggcaacgtagggaacaacctgctggac
ggcgatgtaggtgccgatgccatggcaggtggggacggcaatgacacctacgtggtcgac
gatgtcggcgataccaccagtgaactggccggtggtggcacagatgaggtgcaggtctcc
atggattggacgctggccagccaagtcgagaacttggtgctgcgcgggaccaatttggtc
ggcaccgggaacgaactgaacaacgtgatcacgggtgatgccggcagtgacaccctggac
ggtggcacgggcgcagacaccctggtgggcggtggtggcaatgactcttacgtggtcaac
tccagcacagactcggtgaccgaagcggctagcagtggaaatgacacggtatctgcctct
gtcagctacaccctgggagccaacatcgaaaacctgctgctgagcggctcttcggatctg
aacggcacggggaacgcggatggcaacctgattcgaggcaccagcagctccaacttgctg
gatggcgcggccggtgcggatacgctggaaggtggcgatggggatgacacctacgttgta
gaccacgcaagtgacaccgtcactgaggccctggacgctggcaccgatgaggtgcacgct
tcactcgactggacactgtctgccaatgtggaaaatctgctcctgacgggcagcaccgac
attgatggcacaggcaatgctctggacaacctgatcactggcaacacggctggcaacctg
ctggacggcggtagcgcaggcgatgacactttggtgggcggtaccggcaacgacacctac
gtcgctggcacgggcaacgtgaccatcattgaatgggcgggagaaggcaccgactgggtg
caatccgccgcgtcctacaccctggccgccaccctggagaaccttacgctcacgggcacc
agcaccattgatggcaccggtaacgctgccaacaacatcattcaaggcaacagtgcagcc
aaccgcttggatggtttgaagggcaatgacaccctgacgggcggtgccggtaacgacact
taccatgtcgattcggctggtgatgtcatcacggaaaatacgaacgaggggactgactgg
gtcgaagctgaattcaactacaccctgagcagcaacctggaaaacctgaccctggtggac
aacgggtacaacctgtccggcacggggaatgacctgaacaacagcatcaccggcaatggt
gctgacaactggctggatggtggcgttggccaagactccctggttggcggtgtcggtcac
gacacctatgtgatcgatgacgttggtgatgtgatcaccgaagaggtcagcgaaggcact
gacgaagtgcgatcggccatcaactacaccctgggcaccaatctggaaaacctgaccttg
acggggacaggtaacctcaccgggacgggcaacacgcagggcaacgtcatcaccggtaac
acgggcaacaacacgctggatggcggtacggggaatgactccttcgctgggggcgtgggc
aatgatgtgtacatcgttgacgcggcgttggacgtcatcagcgagctgggtggtgagggt
accgatgaggcccggtcttcggtgtcttacaccttggctgcacaggtcgagaacctggtg
ttgaccggcacgggcaacatcaacggcacgggcaacacccaagccaacagcatcaccggc
aacgcaggcgataacagcctgaacggtgtgtccggcgccgacgcgctgaccggtggtgac
ggtaacgacacctacgtggtcaactcggccgatgatgtggtcacggaagtgcttgacgag
ggcactgatttggtcgagtcgtcggtggattggacgctgggtgccaacttggaagatctg
gtgctgactggcacgggtgacatcgatggcaccggcaacgcgcttgacaatgcgatcgat
ggcaacagcggcgacaactccctggatggggctgcgggccaagacagcttggtcggcggc
gccggtaacgacacttatgtggtcgatgatgccgcagacgaagtcactgaaaacgcaagc
gaaggcaccgatgaagtgcaatcgagcgttagctacaccctgggtgccgagctggaaaac
ctgaccctgacgggcacggccaacatcgacggcatcggtaacacgctggacaacatcatc
atcggcaatgccggtaacaacgcactggatggcgacactggtgccgactcgctggcgggt
ggtgctggcaatgacacctacacggtcaactcgtccaccgacgtggtcacggaagcggct
gccagcggtcaagacttggtcaactcgtcggtcagctgggcgttgggcgagaactttgaa
gacctgaccctgacaggcacggacaacatcaacggaacgggcaacgcgctgaacaacgtc
atcacgggcaacacgggtaacaactcgctgtctggtggtgtcggtatcgattcgctgctg
ggtggtgatggcaatgacacctatgtcgtggacgaggctggcgacacgctgaccgaaacg
gcgggtacggacgaggttcaatcctcggtgagctggacactggccgcagatttcgaaaac
ctggtgctgaccggtacggccaatatcaacggcaccggcaatactagcggtaacgaaatc
gacggcaacagcggtaacaactccctggacggcgcagccggcgcagacagtttggcgggc
ggtgcaggcaacgacacctacgtcgttgacaatgtgggcgatggcgtcaccgaaaacctg
gatgcaggtaccgacgaagtcaagtcgtcggttgactacaccctgggtgccaacgttgaa
aacctgaccctgacgggcgcggacaacatcaacggcacgggcaacgcgctgaacaacatc
atcgtcggcaacactggcaacaacgcactgaatggcgacatcggtgccgactcgctggcg
ggtggtggtggcaatgacacctacacggtcaactcgtccaccgacgtggtcacggaagcg
gttaccagcggccaagacctcgtcaactcgtcggtcagctggacgctgggcgataacgtt
gaagacctgaccctgacgggtacggacaatatcaacggcacgggcaacgcgctgaacaac
gtcatcacgggtaacacgggtaacaactcgctgtctggtggtgtcggtatcgattcgctg
ttgggtggcgatggcaatgacacctatgtcgtggacaacgctggcgacacgctgaccgaa
acggtgggtacggacgaggttcaatcctcggtgaactggacactggccgcagatttcgaa
aacctggtgctgaccggtacggccaatatcaacggcaccggcaatactggcggtaacaga
atcgacggcaacagcggtaacaactccctggacggcgcagccggcgcagacagtttggcg
ggcggtgcaggcaacgacacctacgtcgttgacgatgcgggcgatggcgtcaccgaaaac
ctggatgcaggtaccgacgaagtcaagtcgtcgatcgcctacaccttgggtgccaacgtt
gaaaacctgaccctgacgggcgcggacaacatcaacggcacgggcaacgtgctgaacaac
atcatcgtcggcaacaccggcaacaacgcactgaatggcgactccggtgccgactcgctg
gcgggtggtgctggcaatgacacctacacggtcaactcgtccaccgacgtggtcacggaa
gcggttaccagcggccaagacctcgtcaactcgtcggtcagctggacgctgggcgataac
gttgaagacctgaccctgacgggtacggacaatatcaacggcacgggcaacgcgctgaac
aacgtcatcacgggcaacacgggtcacaacatcctgaccggtggtgcaggtaccgacacg
ctggacggcggcacgggcaacgacacctacatcgtggacggcggtgaaacggtcaccgaa
gccagcggtgcgggtacggatcaggtcacctcgaccgtgacgtggacgttggccgccaat
gtggaaaatttggttttgtatggagccaatgccgcaggggacagcgccatcaatgggttt
ggcaacacgctgaacaacgaaatcatcggtaacggtgcagcgaactacctggacggtggt
tcaggtgctgataccctgaagggtcgcttgggcaacgacacctacgtggttgactcgact
ggggatactctggttgaaggtaacaccttgggtggcaccgatttggttctggcatccgtg
acctgggcgctgggcaccaacttcgagaacctgacgctgacgggaacggctgacatcaac
ggcgccggcaacagcgtgaacaacgttgtgacgggcaacactggtgacaacaagctgagc
ggggctgctggtaacgacaccgttgtcggcggtgatggcgatgacaccctccaaggtggc
actggcaccgacgctctggacggtggcgttggcaacgatgtcatctacaccggcacggcc
ggtggggacaacgctgcggacgtgctggtcttcggcgaaggcgatggcaatgacacggtc
tacgcttacgctaattccgagggggcagccgatgccatcggcctcgatagcacggtgagt
gtcaacgaattggtggtgtcgcgcagcggcgacgatctggtgctgggcctgacctctacg
tccgacacgctgaacgtgaagaacttcttcagctacagcgcatcggatgagttcacggtg
ggcaccattgggttcgcgaccgattcgaccgccaccttgacctatcaagacatcctggcc
caatcgttgatcggtacgggcggtgacgatgtcctgatcggctacgccaccgacgacgaa
atcatcggcaacgctggcaacgacacgctgcatggcaacggtggcgccgacaccctcacc
ggtggcgaagacaacgatgccatctactctggcacggtgtctgaagttgacaacgagtcc
gacaccatcgtttacgcggtcggtgacggcgatgacatcatctacacctacgccagctcc
ttggcgacggcagatgtcatccagttgggcgcgggcatcacggcggcgaacctgtcggcc
agccaagatggtctcgatctggtgctcgacatcggtggcaccggcacgttgaccatcgac
ggcttcttcgaacagaagcaggtgggggcctacacggtgggcagcattgagctggatgac
ggtacgaccttggccgtggccgacatcttggcgctgatcggcgataccgctgttccgatc
gtgtga
DBGET
integrated database retrieval system
