Candidatus Vidania fulgoroideorum: C9I84_056
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Entry
C9I84_056 CDS
T05569
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
vfg
Candidatus Vidania fulgoroideorum
Brite
KEGG Orthology (KO) [BR:
vfg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C9I84_056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vfg03021
]
C9I84_056
Transcription machinery [BR:
vfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C9I84_056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AXN02461
UniProt:
A0A346E0F6
LinkDB
All DBs
Position
50875..52119
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AA seq
414 aa
AA seq
DB search
MKKFRLLSKEEEHKLSKLMTISYKNIIVSIFKIPFFIDVILNKYKNVKKIKEVMDGFFLE
KKNDILAKKCFTNMLKLKKKKLYCKILQIIKTIKISKNIIKSLYTVLIFFYKIIKKIEKK
IFFKIDKKIFNVTKYNKNIIKKLFRKSNDFYKIKIIEFIFKTKIIKIKKYYKRIKKNKVL
SEISRKKMIDHNFRLVISISSKYSNKGLSFSDLIQEGNMGLIKAINKFNYKKKNKFSTYA
TWWIRQSITRAISDQSRTIRIPVHMVENINKINKICKEDNLNIEDINLNNVFNKKMNKKN
IIKIISISKNPISLDVPIKENENTNLYDIVEDKKIDFIEEEINKEKKITVKKLLESLSYR
ESKILKLRFGIGNKKCFTLEKIGKIFGITRERVRQIEFLALKKIKKRKIVKNLT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttagattactttctaaagaagaggaacataaattatctaaattaatgact
atatcttataaaaatattatagtttcaatttttaaaattcctttttttattgatgtaata
cttaataaatataaaaacgttaaaaaaattaaagaagtaatggatggtttttttttagaa
aaaaaaaacgatattttagcaaaaaaatgttttacaaatatgttaaaacttaaaaaaaaa
aaattatattgtaaaatattacaaataataaaaacaataaagatatctaaaaatataata
aaaagtttgtatacagttctaatatttttttataaaataataaaaaaaatagaaaaaaaa
attttttttaaaatagataaaaaaatatttaatgttacgaaatataataaaaatataata
aaaaaattatttagaaaaagtaatgatttttataaaataaaaattatagaatttattttt
aaaactaaaattataaaaataaaaaagtattataagagaataaaaaaaaataaagtattg
agtgaaatatcaagaaaaaaaatgattgatcataattttagattagtaatatccatatct
agtaaatattctaacaaaggtttaagtttttccgatctaatacaggaaggaaatatgggt
cttataaaagctattaacaaatttaactacaaaaagaaaaacaaattttcaacatatgct
acatggtggataagacaatcaataacaagagcaatatcagaccaatctagaacaataaga
atacctgttcatatggttgaaaatataaacaaaataaacaaaatatgtaaggaagataac
ttaaatatagaagatataaatttaaacaatgtatttaataaaaaaatgaataaaaaaaat
attattaagataatatcaatatctaaaaacccaatatcattagatgttcctataaaagaa
aatgaaaatacaaatttatatgatattgttgaagacaaaaaaatagattttattgaagaa
gaaattaataaagaaaaaaagataactgttaaaaaacttttagaatctttatcttataga
gaatctaaaatacttaaattaagatttggtataggaaataaaaaatgttttacattagaa
aaaataggaaaaatttttggaataacaagagaaagagtaagacaaatagaattcttagca
ctaaaaaaaataaaaaaaagaaaaatagttaaaaacttgacatag
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