Aliivibrio fischeri ES114: VF_0003
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Entry
VF_0003 CDS
T00236
Symbol
yidC
Name
(GenBank) cytoplasmic insertase into membrane protein, Sec system
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi02024
Quorum sensing
vfi03060
Protein export
vfi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VF_0003 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VF_0003 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VF_0003 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vfi03029
]
VF_0003 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vfi02044
]
VF_0003 (yidC)
Mitochondrial biogenesis [BR:
vfi03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
VF_0003 (yidC)
Secretion system [BR:
vfi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VF_0003 (yidC)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
DUF2427
Motif
Other DBs
NCBI-ProteinID:
AAW84498
UniProt:
Q5E8Z8
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Position
I:complement(2281..3906)
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AA seq
541 aa
AA seq
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MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTQTDGDVPTSSTANSDTPAD
SAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELGSKAKFVLLKNDATHSYVAQSG
LIGPQGIDSNSGRAQFTAQKTDYVLAEGQNELRVPLTLVKDGITYTKTLILKRDSYAIDV
DYTVDNQSSAPATVEMYTNLKQNLMDDGGSLTMPTYRGAAYSTEDTRYKKYSFDDMEDKN
LSIDMTNGQGWAGMLQHYFASAWIPRNVNDAKLTSRVAGDYGYIGVRMPSVTIPAGQEAT
LSATLWTGPKLQKEMAATAPYLDLTVDYGWLWFIASPLHKLLSFIQGIVVNWGLAIIVLT
FIVRGAMYPLTKAQYTSMAKMRMLQPKLTAMRERIGDDRQRMSQEMMELYKKEKVNPLGG
CLPILLQMPIFISLYWALMESVELRHTPFFGWITDLSAQDPYYILPLLMGASMFLIQKMS
PTTVTDPMQQKIMTFMPVMFTVFFLWFPSGLVLYWLVSNIVTLIQQTLIYRALEKKGLHS
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggatacccaacgtaatattctgttgctcgcactggctttagtttcttttttacttttc
caacaatggcaagtagaaactaatccgcagcaaccagctacagttagtaccgttcaacaa
acacaaacggatggtgatgttccaacttcttcaacagcaaacagtgatacaccagccgat
tcagcacagtctgacaagctgatcacaatcacaactgatgtgcttactttaaaagtagat
acattgggtggtgacatcattgaatctgttcttaataaatacgacgcagaactaggctct
aaagctaaatttgttcttcttaagaacgacgcaacacacagctacgttgctcaaagtggt
ctaatcggtcctcaaggtatcgattcaaactctggtcgtgctcaatttacagcacaaaaa
acagattacgttttagctgaaggccaaaacgaattacgtgttcctttaacattagtgaaa
gacggtattacttatactaaaacactaatccttaaacgcgacagctacgctattgatgtt
gattacacggttgataaccaatcttcagcaccagcaactgttgaaatgtacacaaaccta
aagcaaaacttaatggatgatggcggtagtcttactatgccaacataccgtggtgcagct
tattcaacagaagatacacgctataaaaaatacagctttgacgacatggaagataaaaac
ttatctatcgacatgacaaacggtcaaggttgggcgggtatgctacaacactacttcgct
tcagcttggattcctcgcaacgtaaatgatgcaaaactgacatctcgcgtagcaggtgac
tatggttacattggtgttcgtatgccttctgtaactattccagcaggtcaagaagcaaca
ctttctgcaacactttggacaggtccaaaacttcagaaagaaatggctgctacagcacct
tacctagacctaactgttgattacggttggttatggtttatcgcttcaccacttcataaa
ctattgtctttcatccaaggcatcgttgtgaactggggtctagcaatcattgttcttact
ttcatcgttcgtggtgcaatgtacccactaacgaaagcacagtacacatcaatggctaaa
atgcgtatgcttcaacctaagttgacagcgatgcgtgaacgtattggcgatgaccgtcag
cgtatgagccaagaaatgatggagctttacaagaaagaaaaagtaaacccactaggtggt
tgtttaccaattcttcttcaaatgccaatcttcatttcactgtactgggcattaatggaa
tctgttgaacttcgtcatactccattctttggttggatcacggatttatcagcacaagac
ccatactacatcctgccattattaatgggtgcaagtatgttcttaatccagaagatgagc
ccaacaacagtaacggatccaatgcaacagaagatcatgacgttcatgcctgttatgttc
actgtattcttcttatggttcccatctggcctagttctttactggttagtatcaaacatc
gtaacgttaattcagcaaactctgatttaccgtgctctagagaaaaaaggcttacattct
aagtaa
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