Aliivibrio fischeri ES114: VF_0004
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Entry
VF_0004 CDS
T00236
Symbol
rnpA
Name
(GenBank) ribonuclease P protein component
KO
K03536
ribonuclease P protein component [EC:
3.1.26.5
]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfi03016
]
VF_0004 (rnpA)
Enzymes [BR:
vfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
VF_0004 (rnpA)
Transfer RNA biogenesis [BR:
vfi03016
]
Prokaryotic type
5'processing factors
Ribonucrease P
VF_0004 (rnpA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_P
Rsm22
Complex1_LYR
DUF6575
Fuz_longin_1
Motif
Other DBs
NCBI-ProteinID:
AAW84499
UniProt:
Q5E8Z7
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All DBs
Position
I:complement(4133..4486)
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AA seq
117 aa
AA seq
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MNYDFSRELRLLTPEDYKFVFKQAHRAGSPHFTILARENSLSHPRLGLAVPKKQIKTAVG
RNKFKRIVRESFRNKQHSLPAKDFVVIAKKSAQELSNEDFNKLLDKLWHRLSRPSRG
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgatttctctcgggagttacgcttgttaactcccgaagattacaaatttgtc
ttcaagcaagctcatcgagctggctcgcctcatttcaccattcttgctagagaaaactct
ctttcacaccctcgtttaggtctcgctgttcctaagaagcaaattaaaactgctgttggt
cgcaacaagttcaaacgtatcgttcgtgaaagtttccgcaataagcaacattccttacct
gcgaaagactttgtagttatcgctaaaaagagtgctcaagaattgagtaacgaagacttc
aacaagctattagacaaattatggcatcgcctgtctcgcccttctcgtggatag
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