Aliivibrio fischeri ES114: VF_0017
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Entry
VF_0017 CDS
T00236
Symbol
malS
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00500
Starch and sucrose metabolism
vfi01100
Metabolic pathways
vfi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VF_0017 (malS)
Enzymes [BR:
vfi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
VF_0017 (malS)
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GFIT
Motif
Pfam:
Alpha-amylase
Glyco_hydro_84_hel
DUF4684
Motif
Other DBs
NCBI-ProteinID:
AAW84512
UniProt:
Q5E8Y4
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All DBs
Position
I:19150..20790
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AA seq
546 aa
AA seq
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MKLSVCATLISLSLLVGCQSTPSTDNSSLSENSSNPSSDIAKSTNHDAADSVDIICPQLG
IQPVTVAVSDLWADGEVVTDAYTGRIAQVKNGSVTLTPSRHSGGLLLLESKKEEVPFQWK
NATFYHIATDRFFNGNSWNDHSYGRQKTAQGFQGGDIAGLTQKLDYLAELGVDVLWLSTP
LEQVHGWLPGKNGNYPEYPYAGGATLDWTQLDTNMGTEQEMRIFVDSAHQLGMRVVWSVD
TVPSEPSLADLQQFNIQPQDASELPSYWNEWQPKDGQNLTNYLDAFKDENGQIPQWWSPA
WSDPSSDGNISTPEFFANKPVTNVAQVSRAKNEVLTQWITTWVAKFGIDGVVLSDSTPQL
TQKIEASASKAFELWKTHNQYKALESSSFLVVDLNEKESFKPQIVSMQKNKEQCFSQFTY
RLSTTEKSHDLYAINWFEERGLDELSEANYSEYRDTASALLLSQGNLAIWYGDETAKSGE
AYSEMNWDQMTGLRLSLMSHWKKLLAFRANHSALSDGEYQVIENNSYYAFIRKNKSDNVM
VVYTGE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgtctgtttgtgcaacacttatttcgctgtctttattagttgggtgtcaaagt
acgccatcaactgataattcttctttatcagaaaactcatcaaatccatcatctgacata
gccaagtcaactaatcacgatgcggctgatagcgtagatatcatttgtcctcagctaggc
attcaacctgtaactgtcgctgtttctgatttgtgggctgatggtgaggttgtcaccgat
gcttatactgggcgcattgctcaagtgaaaaatggtagcgttactttaacgccaagtcgt
catagtggtggcttattgctgttagaatcaaaaaaagaagaagtcccttttcagtggaag
aatgccactttctaccacatcgcaacggatagattctttaatggtaacagttggaatgat
cacagctatggtcgacaaaaaacggcacaaggttttcaaggcggtgatatcgcaggactt
actcaaaaactagattatttagctgagttaggtgtcgatgttctttggctttcgacgcca
ctagagcaagtgcatggttggcttccagggaaaaacggtaattatcctgaatacccatat
gcaggtggagctacattagattggactcagcttgataccaatatgggtactgagcaagaa
atgagaatatttgtggattcagctcatcagttaggtatgcgagttgtgtggagtgttgat
actgttccatcagagccaagccttgcagacttacaacaatttaatatccaacctcaagat
gcaagtgagcttcctagctattggaatgaatggcaaccgaaagatggccaaaacctgacg
aattatcttgatgcatttaaagacgaaaatggacaaataccacagtggtggtcacctgcg
tggtcagatcctagcagtgacggtaatatttcaacgcctgagttcttcgcaaataaaccc
gtaaccaatgtagctcaagtgagtcgagctaaaaatgaagtactaactcaatggataact
acgtgggttgctaaatttggcattgatggggtggttttatcggattcaacaccacaattg
actcaaaagatagaggcgagtgcgagtaaagcttttgaattatggaaaacacataatcaa
tataaggcgcttgaatcctcttctttcctagttgttgatttaaatgagaaggaatcattt
aaaccgcaaatagtgtcgatgcagaaaaataaagaacagtgttttagtcaatttacttat
cgtttatctacgactgagaaatcacatgatctatacgcgatcaattggtttgaagaacgt
ggtttagatgagctatctgaagcaaattactctgagtacagagatacagcttcagctctt
ttattatcacagggtaatcttgctatttggtatggcgatgaaacggctaaaagcggtgag
gcttacagcgaaatgaattgggatcaaatgacaggattacgtttgtctcttatgtctcat
tggaaaaaactattagcttttagagcaaaccactcagcattatctgatggagaatatcag
gttattgaaaacaatagttactatgcttttatccgaaaaaacaagtcagacaatgtgatg
gttgtttacactggtgaatag
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