Aliivibrio fischeri ES114: VF_0032
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Entry
VF_0032 CDS
T00236
Symbol
thiC
Name
(GenBank) thiamin (pyrimidine moiety) biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00730
Thiamine metabolism
vfi01100
Metabolic pathways
vfi01240
Biosynthesis of cofactors
Module
vfi_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VF_0032 (thiC)
Enzymes [BR:
vfi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VF_0032 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AAW84527
UniProt:
Q5E8W9
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Position
I:37617..39551
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AA seq
644 aa
AA seq
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MSSSRKQARLDAKTNIESLSVQPYPNSNKVYIEGSRPDIRVPMREISLADSLVGGTKESP
IFEPNEPIQVYDTSGVYTDPSYDIDVYKGLPKLRQEWIEERNDTELLDGVSSVYSQERLA
DETLDELRYGNLPTIRRAKQGQCVTQLHYARQGIITPEMEYIAIRENMGRQKFADEQLNH
QHPGHSFGANLPKEITPEFVRREVAEGRAIIPSNINHPEAEPMIIGRNFLIKVNANIGNS
SVSSSIEEEVEKLVWSTRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKV
NGVAENLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWC
LAHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSVADANDEAQFAELRTLGELTKVA
WEYDVQVIIEGPGHVPMHMIKENMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAA
MIGWYGCAMLCYVTPKEHLGLPNKDDVKTGLITYKLAAHAGDLAKGHPGAQIRDNALSKA
RFEFRWEDQFNLSLDPITAREYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKD
SEQVALDQAIEIKMIDDPLEGMRQKSEEFKASGSELYHPVVEAE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaagtcgtaaacaagcacgtttagatgctaaaaccaatattgaatcgttatcg
gttcaaccatatccaaattcaaataaagtctatattgaaggctctcgtcctgatattcgc
gttcctatgcgagagatttcattagctgacagtttagttggtggtaccaaagaatcacca
atttttgaacccaatgaacctatccaagtttatgacacttcaggtgtgtataccgatcca
agctacgatatcgatgtatacaaaggattacctaagttgcgtcaagaatggatagaagag
cgaaatgataccgagttacttgatggcgtgagctctgtttattcgcaagagcgtttagcg
gatgaaactcttgatgagcttcgttacggaaatttaccaacgattcgtcgagcgaagcaa
ggacaatgcgtcactcaacttcattacgctcgtcagggaatcattactcctgaaatggaa
tatatagcgattcgtgaaaatatgggtcgtcaaaagtttgcagatgagcaacttaatcac
caacatcccggccatagttttggggctaacttaccaaaagaaattacacctgaatttgtg
cgtagagaggttgctgaagggcgcgcaattattccatcaaacataaaccatccagaagca
gaaccaatgatcattggtcgtaatttcttaattaaggtcaacgctaatattggtaactca
tcggtgagttcatcaattgaagaagaagttgagaagttagtttggtcaacgcgttggggc
ggtgatacggtgatggatttatctacgggccgaaatattcacgaaactcgtgagtggatt
ctacgtaatagtccggtgccaattggtacggttccaatgtaccaagctcttgaaaaagtg
aatggtgtagccgaaaacctaaactgggaagtgatgcgagataccttaattgaacaagct
gaacagggggttgattactttaccattcacgctggtttattgcttcgctatgtaccaatg
acagcaaaacgtgtcacagggattgtatctcgtggcggctcaatcattgcgaagtggtgt
ttggctcatcaccaagaaagcttcctttatacacacttccgtgagatctgtgaaatctgt
gctaaatacgatgttgctttatctttgggcgatggcttgcgtccgggctctgttgctgac
gctaatgatgaagcgcaatttgctgaattacgcactttaggtgagctaactaaagttgcg
tgggaatacgatgttcaagtcattattgaaggtcctggtcatgtacctatgcacatgatt
aaagagaatatggatgaacaacttaaacattgccatgaggcgccattttatacactaggg
ccactaacgacagatattgctcctggatatgatcacattacttcaggcattggtgctgcc
atgatcggttggtatggctgtgccatgttgtgttacgtaacgccaaaagaacatttaggt
ttgccaaataaagacgatgtgaagactggcttgattacttataagttagcagcacacgca
ggggatttagccaaaggtcatccaggtgctcaaatccgtgataacgcattatcaaaagcc
cgctttgaattccgttgggaagaccagtttaatctgtctcttgatcctattaccgctcgt
gaatatcacgatgaaaccttaccgcaagaatcaggcaaagttgctcacttttgttcaatg
tgtgggcctaagttctgctcaatgaagatctcacaagaagtcagagagtacgctaaagat
tcggaacaagttgctttagaccaagcaatcgaaattaagatgatagatgaccctctagaa
gggatgcgtcaaaagtcagaagaatttaaagcgtctgggtctgaactttatcatcctgta
gttgaagctgaatag
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