Aliivibrio fischeri ES114: VF_0176
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Entry
VF_0176 CDS
T00236
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00541
Biosynthesis of various nucleotide sugars
vfi01100
Metabolic pathways
vfi01250
Biosynthesis of nucleotide sugars
Module
vfi_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VF_0176
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vfi01005
]
VF_0176
Enzymes [BR:
vfi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
VF_0176
Lipopolysaccharide biosynthesis proteins [BR:
vfi01005
]
Lipid A
VF_0176
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
AAW84671
UniProt:
Q5E8H5
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All DBs
Position
I:195317..196114
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AA seq
265 aa
AA seq
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MFLIAGPCVIESEDLVLDTFAQLQEMTNKLGIEYIAKSSFTKANRSSASAFTGPGLEEGL
KILQKAKDQLGVKIITDVHEDTPLDEVASVVDVLQTPAFLVRQTGFIQRVASMGKPVNIK
KGQWMHPADMAPVVEKCRAVGNDDIWLCDRGTSFGFGALVNYMPGLTIMKETGCKVVMDA
THSVQMPGMLNGSTGGNRLHVPAIARAAVAVGIDGLFMETHPDPDKALCDGPNMLPLKHM
EELLETLLEIDEVVHRRAFIESKLV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaatcgcaggcccatgtgttatcgaatctgaagacttagttttagatactttt
gcacagttacaagaaatgacaaataaacttggtattgaatatattgccaaatcttctttt
actaaagcaaaccgttcatcagcttcggcttttactggtcccggtcttgaagaagggtta
aagatccttcaaaaagcaaaagatcaattaggggtaaaaatcattactgatgttcatgaa
gatacgccattagatgaagttgcatctgtagttgatgttttacaaaccccggcctttctt
gttcgtcaaactggctttattcaacgagttgcctctatgggtaaacctgtaaatattaaa
aaagggcaatggatgcatcctgcagatatggctcctgtagttgaaaagtgccgtgctgtt
ggaaatgatgatatttggctatgtgaccgtggaacaagctttggtttcggtgcattagtt
aactacatgcccggtttaactattatgaaagaaacgggttgtaaagtggtaatggatgca
actcatagtgttcaaatgccagggatgctaaatggttctactggtggtaatcgtctgcat
gtaccagctattgcaagagctgctgttgctgtcggtattgatggtctatttatggaaaca
catccagatccggataaggcattatgtgatggtccaaatatgttaccacttaaacacatg
gaagaactattagaaacgttacttgagattgatgaagtcgttcatcgtagagcttttatt
gaatctaaattggtttaa
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