KEGG   Aliivibrio fischeri ES114: VF_0388
Entry
VF_0388           CDS       T00236                                 
Symbol
lptB
Name
(GenBank) predicted transporter subunit: ATP-binding component of ABC superfamily
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
vfi  Aliivibrio fischeri ES114
Pathway
vfi02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:vfi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    VF_0388 (lptB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vfi02000]
    VF_0388 (lptB)
Enzymes [BR:vfi01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     VF_0388 (lptB)
Transporters [BR:vfi02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    VF_0388 (lptB)
 Other transporters
  Pores ion channels [TC:1]
   VF_0388 (lptB)
SSDB
Motif
Pfam: ABC_tran BCA_ABC_TP_C AAA_21 DO-GTPase2 AAA_23 AAA_14 T2SSE Neprosin AAA_30 nSTAND3 AAA
Other DBs
NCBI-ProteinID: AAW84883
UniProt: Q5E7W3
LinkDB
Position
I:complement(422403..423128)
AA seq 241 aa
MAILEAKNLAKTYGSRKVVSDVSLTVESGKIVGLLGPNGAGKTTSFYMIVGLVARDEGSI
TIDGVDISLQPMHNRSKMGIGYLPQEASIFRKLSVFDNIMAVLQTRKDLNKAERLDKLEE
LLDEFNIQHIRNSNGMALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKII
QHLRDRGLGVLITDHNVRETLDVCEHAYIVSQGHMIANGTPEHVLNDEHVKRVYLGDQFK
L
NT seq 726 nt   +upstreamnt  +downstreamnt
atggccatattagaagcaaagaatttagcaaaaacatacggaagtcgaaaagtagtttcc
gatgtaagtcttaccgttgaatctggaaaaattgttggtttactagggcctaatggtgca
ggtaaaacgacctctttctatatgattgtaggcttagtcgctcgtgatgaaggttcgatt
actattgatggtgtcgacatttcattgcaaccaatgcataaccgctcaaaaatggggata
ggctatctacctcaagaagcttctatttttagaaaattgtcggtatttgacaatatcatg
gccgttttacaaacgcgtaaagatctaaataaagctgaacgtcttgataaacttgaagaa
ctattagatgagttcaatatccagcacatccgtaatagtaatggtatggcgctatctggt
ggtgaacgtcgtcgtgttgaaatcgcacgcgcactcgcagcaaatcctaaattcatttta
ttggatgaaccatttgcgggtgttgaccctatctctgttattgatatcaaaaagatcatc
caacatctaagagatcgtggtttaggcgtattaatcactgaccacaatgttcgcgaaacg
cttgatgtatgtgagcacgcttacatcgtaagtcaaggtcacatgattgcaaatggcaca
cctgaacacgtattaaatgatgaacacgtaaaacgtgtttatcttggtgatcaatttaag
ttgtaa

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