Aliivibrio fischeri ES114: VF_0448
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Entry
VF_0448 CDS
T00236
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase
KO
K04763
integrase/recombinase XerD
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vfi03036
]
VF_0448 (xerD)
Chromosome and associated proteins [BR:
vfi03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
VF_0448 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
AAW84943
UniProt:
Q5E7Q3
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All DBs
Position
I:477430..478326
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AA seq
298 aa
AA seq
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MNNDMALMERFLDTMWMERGLSENTLASYRNDLVKLLQWLEDNHYKCASISAMGLNEFQA
YLVDKEYKQTSRARMLSALRRFFQYLHREKIRGDDPTALLASPKLPQRLPKDLSEEQVDA
LLNAPNVEDPLELRDRAMLELLYATGLRVTELVSLTMENVSLRQGVVRVTGKGDKERLVP
MGENAVDWIEQFLTHGRPMLLGEKSSDVVFPSKRAKQMTRQTFWHRIKHYAVIAGIDSDK
LSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHQEHHPRS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgatatggcattaatggagcgttttttagataccatgtggatggagcgtggc
ctgtctgaaaatacgttggcttcatatcgaaacgatttagtgaagttgttgcagtggtta
gaagataatcactataaatgtgcttctatttcagcgatgggacttaatgagtttcaagct
tatttagttgataaagaatataaacaaacttctcgagctcgaatgctgtctgcattacgt
cgtttttttcagtatttacatcgtgaaaaaatccgcggagatgatcccacagcattactt
gctagccctaaattacctcaacgcttaccaaaagatttaagtgaagagcaagttgatgcg
ttgcttaatgctccgaatgtcgaagatcctctagagcttcgagatcgagcaatgttagaa
ctactttatgcaacaggtttacgtgttactgagctagttagcttaaccatggaaaatgta
agtttacgccaaggtgttgtacgagttactggtaaaggtgataaagaacgtttagtccca
atgggagagaatgccgtagattggattgagcagtttttaactcatggtcgtccaatgctg
cttggtgaaaaaagttcggatgtcgtgtttcctagtaaacgagcaaaacaaatgactcgt
cagacattttggcaccgaattaagcattatgctgttattgctggtattgattctgataaa
ttatcgccacacgtattgcgacatgcttttgctacacatcttttaaactatggcgcagat
ctccgtgttgtacaaatgttgttaggacatagtgatctttcaacaacacaaatatatact
catgtagcaacggaacgtttgaagcaaattcatcaagagcatcaccctcgctcataa
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