Aliivibrio fischeri ES114: VF_0695
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Entry
VF_0695 CDS
T00236
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00260
Glycine, serine and threonine metabolism
vfi00460
Cyanoamino acid metabolism
vfi00630
Glyoxylate and dicarboxylate metabolism
vfi00670
One carbon pool by folate
vfi00680
Methane metabolism
vfi01100
Metabolic pathways
vfi01110
Biosynthesis of secondary metabolites
vfi01120
Microbial metabolism in diverse environments
vfi01200
Carbon metabolism
vfi01230
Biosynthesis of amino acids
vfi01240
Biosynthesis of cofactors
vfi04981
Folate transport and metabolism
Module
vfi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VF_0695 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VF_0695 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VF_0695 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VF_0695 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VF_0695 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VF_0695 (glyA)
Enzymes [BR:
vfi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VF_0695 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AAW85190
UniProt:
Q5E706
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All DBs
Position
I:758768..760018
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDADLFAAIQEETVRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKVETLAIERACELFGAEYANVQPHSGSQANNAVYMALLNAGDTVLGMS
LAHGGHLTHGSPVNFSGKLYNIIPYGIDENGQIDYEEMEALAVEHKPKMIIGGFSAYSQV
CDWARMREIADKVGAYFFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
SNEGEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKEYQARVVANAKAMVAE
FLARGYNIVSGSTENHLFLVDLIDKDITGKEADAALGSANITVNKNSVPNDPRSPFVTSG
IRIGSPSITRRGFTEEDAKNLAGWMCDILDNMGDESVIEATKAKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacgtgatatgaacattgccgattacgatgcagacttatttgcagcaatccag
gaagaaacagtacgtcaagaagagcatatcgagctgattgcttctgaaaactacactagc
ccacgagtaatggaagctcaaggttcacaattaacgaacaaatatgctgaaggttaccct
ggcaaacgttactacggtggttgtgagtacgtagataaagttgaaacacttgctattgaa
cgtgcatgtgagttgtttggtgcagagtacgcaaacgtacagcctcactctggttcacaa
gcaaataacgcagtttacatggcactactaaatgcgggtgatactgtattaggtatgagc
cttgctcacggtggtcacttaactcacggttctccagtaaacttctctggtaaactttac
aacatcattccttacggtattgatgaaaatggtcaaattgactatgaagagatggaagca
ttagcagtagaacataagcctaagatgatcattggtggtttctctgcttactctcaagta
tgtgattgggcacgtatgcgtgaaattgcagacaaagtaggcgcttacttcttcgtagat
atggctcacgtagcaggtcttattgctgcaggtgtttaccctaaccctgtgccacatgct
cacgttgtaacaacaacgacacacaaaacacttgctggtcctcgtggtggtcttatcctt
tctaatgaaggtgaagatctttacaagaagttaaactcagcagtattcccgggtggtcaa
ggtggtcctttaatgcacgttattgctggtaaagcagttgcatttaaagaagcgcttgaa
cctgagttcaaagaatatcaagcacgtgttgttgctaatgcaaaagcaatggttgctgaa
ttcttagctcgtggttacaacatcgtttcaggttcaacagagaaccacctgttcctagtt
gatttaattgataaagatattacaggtaaagaagcggatgctgcactaggttctgctaac
attacagtaaacaagaactcagtaccgaatgaccctcgtagcccgtttgttacttctggt
attcgtattggttctccttcaattacgcgtcgtggttttactgaagaagatgcgaaaaac
cttgcaggctggatgtgtgacattctagataacatgggtgatgagtctgtgattgaagcg
acaaaagcaaaagtattagaaatctgtaagcgtctaccagtttacgcttaa
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