Aliivibrio fischeri ES114: VF_0745
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Entry
VF_0745 CDS
T00236
Symbol
dacA
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00550
Peptidoglycan biosynthesis
vfi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VF_0745 (dacA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vfi01002
]
VF_0745 (dacA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfi01011
]
VF_0745 (dacA)
Enzymes [BR:
vfi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VF_0745 (dacA)
Peptidases and inhibitors [BR:
vfi01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
VF_0745 (dacA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vfi01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
VF_0745 (dacA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AAW85240
UniProt:
Q5E6V6
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All DBs
Position
I:complement(812045..813220)
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AA seq
391 aa
AA seq
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MKNSAKQLKRLILSSFILGSTVAVAAPAVIPNAPQIAAKGYVLMDYHSGKVLAEKDMNVR
MNPASLTKMMTSYVIGQEIESGNISMDDDVVISKNAWAKNFPGSSKMFIEVGSTVKVREL
NKGIIIQSGNDACVAMAEHVAGSEDAFVDLMNAWAKTLNLKNTHFANVHGLDRDDLYSTP
YDMALIGQALIRDVPEEYRVYSEKSFTYNGITQYNRNGLLWDKSMNVDGIKTGHTNGAGF
NLVSSATEGKMRLVAVVMGTKSGNARKAESKKLLNYGFRFFETVSPHKANETFVTEKVWM
GSTDEVALGVAEDTYVTLPRGQAKKMTASFVLEKTLEAPIYKGDVVGKLYYQIDGEDIAE
YPLLALNDVEEGGIFSRLIDYIVLMFKGWLS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattcagcgaaacagttaaaacgacttatcttatcgagctttattttaggctca
accgttgctgtagcagcacctgcggttattccaaatgcaccgcaaatcgcagctaaaggc
tacgtattaatggactatcattcaggcaaagtattggctgaaaaagatatgaacgttcgt
atgaaccctgcaagcttaactaaaatgatgacaagttatgttatcggtcaagaaattgaa
agtggcaacatttcaatggatgacgatgttgttatcagcaaaaatgcttgggctaaaaac
ttccctggttcatcaaaaatgttcatcgaagtgggtagtactgtaaaagttcgtgaactt
aataaaggtattatcattcaatcaggtaacgatgcttgtgttgctatggctgaacacgta
gccggctctgaagatgcattcgttgacctaatgaacgcgtgggcaaaaacattaaatctg
aaaaacacacactttgctaacgttcatggtcttgatcgtgatgacctatactcaacgcct
tatgatatggcattgattggtcaagcattaatccgagatgtacctgaagaatatcgcgta
tattctgaaaaatcattcacttacaacggtatcactcaatacaaccgaaatggtctattg
tgggataaaagcatgaacgttgatggcattaaaacaggccatacaaacggtgctggtttt
aacctagtaagttcagcaactgaaggcaaaatgcgtttagttgccgttgttatgggaact
aaatctggtaatgcgcgtaaagctgaaagtaaaaagttactgaattacggtttccgtttc
tttgaaactgtttctccacataaagctaatgaaacattcgtaactgaaaaagtatggatg
ggtagcactgacgaagttgctttaggtgttgcagaagacacgtatgttactttaccacgt
ggccaagctaagaaaatgacagcaagctttgtattagaaaaaacgcttgaagcacctatc
tacaaaggtgatgttgttggtaagctttactaccaaatcgatggtgaagacattgctgaa
tacccactattagctctaaatgatgttgaagaaggtggcatctttagccgtcttatcgat
tacattgttctaatgtttaaaggctggttaagctaa
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