Aliivibrio fischeri ES114: VF_0954
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Entry
VF_0954 CDS
T00236
Symbol
cydB
Name
(GenBank) cytochrome d terminal oxidase, subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00190
Oxidative phosphorylation
vfi01100
Metabolic pathways
vfi02020
Two-component system
Module
vfi_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
VF_0954 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VF_0954 (cydB)
Enzymes [BR:
vfi01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
VF_0954 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
DUF4736
DUF6704
Motif
Other DBs
NCBI-ProteinID:
AAW85449
UniProt:
Q5E697
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All DBs
Position
I:1050580..1051716
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AA seq
378 aa
AA seq
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MFDYEVLRFVWWALIGVLLIGFAVTDGFDMGVGALVPVIGKTDSERRVMINSIAPHWDGN
QVWLITAGGALFAAWPLVYATSFSGFYLAMIVTLAALWFRPVGFDYRSKIEDKRWRSAWD
AAIFIGSFVPPVIFGVAFGNLLQGVPFQLDNLMMPTYHGSFFGLLNPFALVCGLVSSFMF
ITQGATWLQMKTTGELHTRARNIAMIFSALVVVLFVIAGIWAQSIEGYVIVGSLDHFAPS
NPLNKEVAREVGALFHNFNEYPLLWIAPALAVIMPIVTIIASRANIGGLAFLSSSLTNAG
VILTSGFALFPFVMPSSLNPNHSLTMWDSTSSELTLTLMTYVAIVMVPIILAYTIWTYIK
MFGRLDNKFIEENKTSLY
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattacgaagtattgcgatttgtttggtgggcattaatcggtgtattgctgatt
ggcttcgctgtaacagatggattcgatatgggtgttggtgcactagtacctgttatcggt
aaaacagattcagaacgtcgagttatgattaactcaattgcccctcactgggatggtaac
caagtatggttaatcacagcaggtggtgcattattcgcagcatggccattagtatacgca
acatcattctcaggtttttacctagcaatgatcgtaacgttagcagcactatggttccgt
cctgttggatttgattaccgttctaaaattgaagataagcgctggcgttcagcgtgggat
gcagcgatctttattggtagcttcgttccaccagttatctttggtgttgcgtttggtaac
cttttacaaggcgtaccattccaactagataacctaatgatgccaacataccatggttca
ttctttggtctgttaaacccatttgcactagtgtgtggcctagtaagttcatttatgttc
attactcaaggcgctacatggctacaaatgaaaacaacgggtgagttgcacactcgcgca
cgaaatattgcgatgatctttagtgctcttgtggttgttttgtttgtaattgctggtatc
tgggctcaaagcattgaaggttatgtgattgtaggtagcttagatcactttgctccgtca
aacccattaaataaagaagtcgctcgtgaagtaggtgctttgttccataacttcaacgaa
tacccattactatggattgctccagcattagctgtgatcatgcctatcgttacaattatt
gcatctcgtgcaaatattggcggtcttgcgttcttaagctcaagcttaacgaacgctggt
gttatcttaacttctggttttgcgttattcccattcgtaatgccatcgagcttgaaccct
aaccatagcttaactatgtgggattcaacttcaagtgagttaacacttacgctaatgaca
tacgttgctatcgtaatggtaccaattattcttgcttacactatctggacgtacattaaa
atgtttggtcgtcttgataataaattcattgaagagaacaaaacgtctctatactaa
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