Aliivibrio fischeri ES114: VF_1038
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Entry
VF_1038 CDS
T00236
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfi03009
]
VF_1038 (rluB)
Enzymes [BR:
vfi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
VF_1038 (rluB)
Ribosome biogenesis [BR:
vfi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VF_1038 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Cementoin
Motif
Other DBs
NCBI-ProteinID:
AAW85533
UniProt:
Q5E613
LinkDB
All DBs
Position
I:1144323..1145387
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AA seq
354 aa
AA seq
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MSEKLQKVLARAGLGSRRELETMIQAGRVSVDGQRAKLGDRLENVDAKIRIDGHVVSVKE
STDVICRVLAYHKPEGELCTRHDPEGRRTVFDRLPKIRDSRWVSVGRLDANTAGLLLFTT
DGELANRLMHPSRKVEREYMCRVFGEINEKMIRNLVTGVKLEDGEARFEDVMYAGGEGMN
HTFYVVINEGRNREVRRLWDSQGVTVSRLKRVRYGDIFLEKALPRGGWMELELKEVNYLR
EMVELPPEKESLLDVDKESRKRAKSKTQKIRRAVKRYDERSTEERNTPAGRRGRNNKKPV
GSSLPSAKRGSNNGDSQPSGKPQSKGKKPAAGQKPVRSKFSPNGKAPKSKPRQR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaattacagaaagtattagcacgagcaggtcttggttctcgtcgtgagcta
gaaaccatgattcaagctggtcgtgttagtgttgatggtcagagagcaaaattaggcgac
cgcctagaaaacgtggatgctaaaatccgtattgatggccatgtcgtatcggttaaagag
tcaactgatgtgatctgtcgagtacttgcctatcataaacctgaaggtgagctatgtaca
cgtcatgaccctgaaggtcgtcgtactgtatttgatcgtttaccaaaaattcgtgattct
cgttgggtatcagttggccgtttggatgctaataccgctggtttattgcttttcactaca
gatggtgaattagcaaaccgtttgatgcacccaagtcgtaaagttgaacgtgaatacatg
tgtcgtgtatttggtgaaattaacgagaaaatgattcgtaatctagttactggtgtaaaa
ctagaagacggtgaagcgcgttttgaagatgtaatgtacgccggcggtgaaggtatgaac
catactttctacgttgttattaatgaaggccgtaaccgtgaagtacgtcgtttatgggat
tcgcaaggtgtaacggtaagtcgtctaaaacgtgttcgttacggtgatatcttccttgag
aaagctttaccacgtggtggttggatggagcttgaacttaaagaagttaactacctacgt
gagatggttgaattaccgccagagaaagaaagtctacttgatgtagataaagagtctcgt
aagcgtgctaaatcaaaaactcaaaagatccgtcgtgctgttaagcgttatgatgagcgt
tcaacagaggagcgtaatactccagcgggtcgtcgtggccgcaacaataaaaaaccagtt
ggtagttcactgccttcagcaaaacgtggctctaataatggggatagccaaccttctggt
aagccacaatctaaaggtaaaaaaccagcagctggtcaaaaaccagtaagaagtaagttt
tcaccaaacggtaaagcgccaaagtctaaacctagacagcgttaa
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