KEGG   Aliivibrio fischeri ES114: VF_1628
Entry
VF_1628           CDS       T00236                                 
Symbol
polB
Name
(GenBank) DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
vfi  Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:vfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vfi03400]
    VF_1628 (polB)
Enzymes [BR:vfi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VF_1628 (polB)
DNA repair and recombination proteins [BR:vfi03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    VF_1628 (polB)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNA_pol_B_2 DNApolII_insertion
Other DBs
NCBI-ProteinID: AAW86123
UniProt: Q5E4C3
LinkDB
Position
I:complement(1828969..1831314)
AA seq 781 aa
MLTRQTREINNQSLVDLWVKCDDHIAHLLIENEDAVTFILEDKRSQYEACLQKENIPFHI
KPTALSTFNHDSVLGLYFKNTYQKRAATQFIEQLHLPIYESDIRLADRYLMERFICGGLS
FIGNPIQKKDHIEYRNVKIKTTDRSPKFSMVSLDIECSEKGILYSVALHSELDTRIIMVG
DSQDSNLSIQWVENEKALLVALESWFYQFDPDIIIGWNVINFDFRLLIQRAKWHKLSFRI
GRGNSSLYWRDSDKNRQQGFLSFPGRVVLDGIDALKTATYHFSSWSLESVAQELLKEGKS
INDQSDKMSEINRMYREDKLSLAKYNLQDCILVTRIFEHTHLLEFLIERTKLTGVELDRV
GGSVAAFTNLYLPRLHRAGYIAPNLESENWVASPGGYVMNSKPGLYQSVIVLDFKSLYPS
IIRTFNIDPLGLIEGLKQEVGTEDNQAIDGFRGGRFHRSKHFLPKLIENLWSARDEAKRN
NEKAFSQAIKIIMNSFYGVLGSSGCRFFDHRLASSITMRGHEIMKMTRELIEAEGYEVIY
GDTDSTFVTLGQSMSSKEADTIGSSLVEKINQWWISHLSEKYAIDSALEIEYETHYRTFL
MPTIRGSETGSKKRYAGLVKKEGKEEIVFKGLETVRTDWTPLSQEFQKTLFHKVFHQQDV
KEYVRQYVDDTKQGKLDKQLIYRKRLRRQLDEYQKNVPPHVKAARLADYRNQQIGKRPQY
QYGGWIEYVITTAGPEPVEYINNPIDYDHYVEKQLKPIADGILPFIGLDFNELSNSQLGL
F
NT seq 2346 nt   +upstreamnt  +downstreamnt
ttgcttacacgtcaaactagagaaattaataatcaaagtttagtcgacctctgggttaag
tgtgatgatcatattgcacacttacttattgagaatgaagatgcagttactttcatatta
gaggataagcgctctcagtatgaagcttgcttacagaaagaaaatatcccttttcatata
aaaccgacggcattatccacatttaatcatgattccgtgctcggtttgtattttaaaaat
acctaccaaaaacgagcagcgactcaatttattgaacaattacatttacctatatatgaa
agcgatattcgcttagctgatcgttatttaatggagcgttttatttgtggtggcctatca
tttattggcaacccaatacaaaaaaaagaccatattgaatatcgtaatgtaaaaatcaaa
acgacggatcgttcacctaaatttagtatggtttcattagatattgagtgttcagaaaaa
ggcattctatattccgtcgctctacatagtgaactcgatacacgtattatcatggtgggc
gactcacaggacagtaatttgtctattcaatgggtggaaaatgaaaaagcactgctcgtt
gctttagagtcttggttttatcaatttgatccagacattattattggctggaatgtgatt
aattttgattttcgattattaattcagagagcaaaatggcacaaattatcttttcgtatt
ggtcggggtaacagttcgctttattggcgtgattccgataaaaatcggcaacaaggtttt
ttatcttttcctgggcgcgttgtgctagacggtattgatgctctgaaaactgcgacttat
catttctctagttggtcacttgaatcagtagctcaagagttattgaaagaaggtaaatcg
attaatgatcaaagcgataaaatgtctgagatcaatcgaatgtatcgagaagataaactt
tctttagctaaatacaaccttcaagattgtattttggttactcgtatatttgaacatact
catctcttagagtttttgattgagcgaacgaaattaacgggggttgagcttgatcgtgtt
ggaggttcagttgctgcatttactaacttgtatttaccaaggcttcacagagcagggtat
attgcacctaatttagagagtgagaattgggttgcaagtcctggtggctatgtaatgaac
tctaagccaggtttatatcaatctgttatcgttcttgattttaaatctctttatccctct
attattcgtacgtttaatattgatcctttaggcttgattgaaggattaaaacaagaagta
ggtacagaagataatcaagccattgatggttttagagggggacgatttcatcgttctaaa
cacttcttacctaaattaattgaaaatttatggtctgctcgagatgaagcaaaaagaaat
aatgaaaaggcattttctcaagcaataaaaatcataatgaactcattttatggtgtgcta
ggctcgtcaggttgtcgtttttttgatcatcgattagcctcttcaataaccatgcgtggg
catgaaattatgaaaatgactcgtgagttgattgaagcagaaggttatgaagttatatac
ggcgatactgactctacgtttgttactcttgggcaatcaatgtcatcgaaagaagctgac
actattggttcatctttggttgaaaagataaatcagtggtggatttcccacttatctgaa
aaatacgcaattgattcagcattagaaattgaatatgaaactcattatcgaacgttttta
atgccgacgattcgagggtcagaaactgggtctaaaaagcgttatgctggtttagtaaaa
aaagaaggtaaggaagaaattgtatttaaaggattagagacagttagaacggattggact
ccattatcacaagaatttcagaaaacattattccataaagtatttcatcaacaagatgta
aaagaatacgttcgacaatatgttgatgatactaagcagggcaagttagataagcagctc
atttatagaaagcgtttgagaagacagttggatgaatatcaaaagaacgttcctcctcac
gttaaagcggcacgattagcagattatcggaatcaacaaataggaaaaaggcctcaatat
caatatggtggatggatagagtatgtcattaccactgcaggacctgaaccggttgaatat
ataaataatccgattgattatgaccattatgtagagaaacaattgaaaccgatcgcggat
ggaattctcccttttatcggtttagattttaatgaattatctaactctcaattaggtcta
ttttaa

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