Aliivibrio fischeri ES114: VF_1631
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Entry
VF_1631 CDS
T00236
Symbol
hns
Name
(GenBank) global DNA-binding transcriptional dual regulator H-NS
KO
K03746
DNA-binding protein H-NS
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vfi03036
]
VF_1631 (hns)
03400 DNA repair and recombination proteins [BR:
vfi03400
]
VF_1631 (hns)
Chromosome and associated proteins [BR:
vfi03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
VF_1631 (hns)
DNA repair and recombination proteins [BR:
vfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VF_1631 (hns)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
CUX1_N
DUF3037
Helical_CED_Drosha
Rep_fac_C
DUF6589
FapA_N
FUT8_N_cat
RdRP
DUF1840
Motif
Other DBs
NCBI-ProteinID:
AAW86126
UniProt:
Q5E4C0
LinkDB
All DBs
Position
I:1834206..1834727
Genome browser
AA seq
173 aa
AA seq
DB search
MDIININIINIFLFLYLEICYIIFLLYYNHIIKIIMESNMSDTIKTLLNLRSLRALSREM
TLEQLEEALEKLQSVVAERQESEAEERAQLAEKQAKLEEFRQMMIDSGIAPEDLLDTMSA
TTVKTKQKRAPRPAKYKFQDHAGEEKTWTGQGRTPSALQAQLDAGKKLEEFLI
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggatattattaatattaatatcattaatatttttttattcctttatctagaaatttgt
tatattatttttctgttatattataatcatattatcaaaataattatggaatcaaatatg
tctgatacaattaaaacgctgcttaacctacgcagcctacgtgctttatctcgcgaaatg
actttagaacaattagaagaagcattagaaaaacttcaatctgttgttgcagaacgtcaa
gaatctgaagcagaagagcgcgctcaactagctgaaaaacaagctaaacttgaagagttc
cgtcaaatgatgatcgacagcggcatcgctcctgaagatctattagacactatgtctgct
acaacagtaaaaacaaaacaaaaacgcgcacctcgtcctgcaaaatataaattccaagat
cacgctggtgaagagaaaacatggacaggccaaggccgtactccttcagctcttcaagca
cagcttgatgctggtaaaaaactagaagagtttttaatctaa
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