Aliivibrio fischeri ES114: VF_1671
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Entry
VF_1671 CDS
T00236
Symbol
menD
Name
(GenBank) bifunctional 2-oxoglutarate decarboxylase/SHCHC synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00130
Ubiquinone and other terpenoid-quinone biosynthesis
vfi01100
Metabolic pathways
vfi01110
Biosynthesis of secondary metabolites
vfi01240
Biosynthesis of cofactors
Module
vfi_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
VF_1671 (menD)
Enzymes [BR:
vfi01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
VF_1671 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Glyco_hydro_85
Motif
Other DBs
NCBI-ProteinID:
AAW86166
UniProt:
Q5E480
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Position
I:complement(1879842..1881575)
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AA seq
577 aa
AA seq
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MMQPEQQVMLNQVWAELIIEELVRNGVKHICIAPGSRSTPLTLAASEHALLSIHTHFDER
GLGFLALGIAKASNDPVAVIVTSGTAVANLLPSVAESGLTKEKLVLLTADRPVELINCGA
NQAINQQGIFSSHVCHSLQLPSPSQNVPAQWLLSRLDQACFVQQEQGGAIHINCPFPEPF
YGKKDDSLLVDYLAPIQNWKADTSSYIQQTPYFSHVTLSPNWMQTARKKGVVIIGKVSLE
EANCAAQLAKELGWPVLADPQSGYYSEWAHYDLWLQNSACFELLSEVECVLQFGARLVSK
RLGAWLKNYQQAYYLIDPHSELLNESCHAHVRYRADISTWCQTHADSLADRDCVFDHAPS
VHWSESLKVASQNALALARSMACNSETLSELSFALTVGQKANDCDWFVGNSLIVRLLDMT
GELNQKNVYTNRGASGIDGLVATAVGVQLANDKPLLALVGDTSLLYDLNSLALLKQATQP
MVVVVMNNDGGGIFDLLPVNEKKKDDFYRMPHQLEFSHAAAMFGLSYHRPETLSCAMSMI
NDGLEKGIHLIEINTPAGQSGEELTRLFQTIQHAALF
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacctgagcagcaagtaatgctaaatcaagtttgggctgagttaattattgag
gagttagttcgaaatggagtaaagcatatttgcatcgctccgggctcgcgttcaacccca
ctaactcttgccgcttctgaacatgctcttttatccatccatacccattttgatgagcgt
ggcttgggcttcttagctttaggtattgctaaagcatccaatgatcctgttgctgttatt
gtcacttcaggtactgcagtcgctaatttattgccatcagttgctgaatcaggattaacc
aaagaaaaactcgtcttacttactgcagatcgccctgttgaattgattaattgtggagcg
aaccaagcaattaatcagcagggtattttttcgtcacacgtttgccattcgcttcaattg
ccttctccaagtcaaaacgtgccggcacagtggttattaagccgtcttgatcaagcgtgc
tttgttcaacaagagcagggtggcgctatccatattaattgccctttccctgagccgttt
tatggcaaaaaagacgatagccttcttgttgattatttagcaccaattcagaactggaaa
gcggatacttcttcttatatacaacaaacaccttacttttctcatgtaacgttatcacct
aactggatgcaaacggcacgtaagaaaggggttgttattatcggtaaagtctctttagaa
gaagcaaattgcgcagcacagttagcaaaagaacttggttggccagtattggcagatcca
caatcaggttattattcagagtgggcacattacgatttgtggctacaaaatagtgcgtgt
tttgagttgttatccgaagttgagtgcgttttgcaatttggtgctcgattagtatcaaaa
cgtttgggtgcatggttgaaaaactaccaacaggcctattatttaatagatcctcatagt
gagttattaaacgaaagttgtcatgcacatgttcgttatcgtgctgatatttcaacttgg
tgccaaacacacgcagacagccttgctgatagagattgtgtatttgaccatgcgccatct
gttcattggagtgaatctcttaaagtggcatcacaaaatgcattggcgctggctcgttct
atggcgtgcaatagcgaaacattatctgaattaagctttgcgcttaccgtaggccaaaaa
gccaatgattgcgattggtttgttggtaacagcttgatagttcgcttattagacatgacc
ggtgagcttaatcaaaaaaatgtatataccaatcgtggcgcttcaggtattgatggttta
gtggctacagccgttggggttcagttagctaatgataaaccgttactcgctttagttggg
gatacgtcattactttatgatttgaattctttagcgttattaaagcaagcgacgcaacct
atggttgttgtggtgatgaataacgatggcggtggtatttttgatttattacccgtgaat
gaaaaaaagaaagatgatttctatcgtatgcctcatcagctagagttcagccatgctgct
gcgatgtttggtttgtcctaccataggccagaaactctaagctgtgccatgtcaatgatt
aacgatggcttagaaaagggtattcatttaattgagatcaatacaccagcaggtcaatct
ggtgaagagctaacacgtctttttcagaccattcagcatgccgctttattctaa
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