Aliivibrio fischeri ES114: VF_1708
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Entry
VF_1708 CDS
T00236
Symbol
fadD
Name
(GenBank) acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00061
Fatty acid biosynthesis
vfi00071
Fatty acid degradation
vfi01100
Metabolic pathways
vfi01212
Fatty acid metabolism
vfi02024
Quorum sensing
vfi04146
Peroxisome
Module
vfi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VF_1708 (fadD)
00071 Fatty acid degradation
VF_1708 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VF_1708 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
VF_1708 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vfi01004
]
VF_1708 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vfi04147
]
VF_1708 (fadD)
Enzymes [BR:
vfi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VF_1708 (fadD)
Lipid biosynthesis proteins [BR:
vfi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VF_1708 (fadD)
Exosome [BR:
vfi04147
]
Exosomal proteins
Exosomal proteins of breast milk
VF_1708 (fadD)
Exosomal proteins of breast cancer cells
VF_1708 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
AAW86203
UniProt:
Q5E443
LinkDB
All DBs
Position
I:complement(1924207..1925889)
Genome browser
AA seq
560 aa
AA seq
DB search
MDKVWLSRYPKDVPAEINPDEYTSLVDMFEKSVHKYADQPAFINMGSVMTFRKLEERSRA
FAAYLQNELKLKKGDRVALMMPNLLQYPIALFGVLRAGMVAVNVNPLYTPRELEHQLNDS
GAAAIVIVSNFASTLEEVVDNTPVKHVILTNLGEQLPRAKGTIVNFVVKYVKKMVPKYDL
PHATSMRNALRKGRRMQYIKPFIESEDLAFLQYTGGTTGVAKGAMLTHRNMIANVMQAKG
AYGPVLTEGRELIVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFIKELQKYPF
TAITGVNTLFNALVNNEDFHELDFSNLRLAVGGGMAVQRAVAEKWQQHTGCYLLEGYGLT
ECSPLVAAYPHDLTSYNGSIGLPVPSTEVRMIDDEGNVLTNDQVGELQVRGPQVMKGYWN
RAEATKDMICEDGWVSTGDIVKFDDEGFLHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAVGKPHPTSGEVVRICVVKRDPSLTKDELVAHCRKHLTGYKIPRIVEFRDDLPKT
NVGKILRRELRDEYKAEENA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtggataaagtttggctttcacgttacccaaaagacgtaccagcagaaattaacccagat
gaatacacctcattagtggatatgtttgaaaaatcggttcataaatatgccgatcaacca
gcattcattaatatgggctcagtaatgacattccgtaagctagaagagcgtagccgtgct
tttgcagcttacttacaaaatgaactgaagcttaaaaaaggtgatcgtgttgcgttaatg
atgccaaacttactgcaatacccaattgcattatttggtgtacttcgtgccggtatggtt
gcggtgaacgttaacccactttacacaccacgtgaattagagcatcaactgaatgattca
ggcgctgctgctattgttatcgtttcaaacttcgctagtacgctagaagaagtggttgat
aatacacctgttaaacacgttattttaacgaatttaggtgagcaacttcctcgagcgaaa
ggcactatcgttaacttcgttgttaagtacgtgaagaagatggtaccaaaatacgatctt
ccacatgcgacatctatgcgtaatgctctgcgtaaaggtcgtagaatgcagtacattaag
ccatttattgaaagtgaagacttagccttcctacaatacacaggtggtactacgggcgtt
gcaaaaggcgcgatgctaactcaccgcaatatgatcgcaaacgtaatgcaagcaaaaggc
gcttatggccctgtattgactgaaggccgtgaactgattgttactgcacttcctctttat
catgtatttgcgttaacggttaactgtttactgtttattgaaatgggtggtcgtaacctg
cttatcactaaccctcgtgatatcccaggtttcattaaagagcttcaaaagtacccattc
acggcgattactggtgtaaatacattattcaatgcattagtaaataatgaagatttccat
gagttagactttagtaatttacgtctggctgttggtggtggtatggctgtgcaacgtgct
gttgcagaaaaatggcaacaacacacaggttgttacttattagaaggctacggtttaact
gagtgttcaccactggtagcggcatacccacatgatttaacgtcatacaatggttcaatt
ggtctacctgtaccatcaacagaagttcgtatgattgatgatgaaggtaacgtactaact
aacgatcaagttggtgagcttcaagttcgtggaccacaagtaatgaaaggttactggaac
cgtgcagaagcaacaaaagatatgatttgtgaagacggttgggtgagtactggtgatatc
gttaaatttgacgatgaaggtttcttacatattgttgaccgtaaaaaagacatgatttta
gtatctggctttaacgtttatccaaatgaaattgaagatgttgtagcgcttcatggaaaa
gttctagaagtggcagcagttggtaaaccgcatccaacttcaggtgaagtggttcgcatt
tgtgtagttaaacgcgaccctagcctgactaaagatgagttagtggcacactgtcgtaaa
caccttacaggttacaaaatccctcgtattgttgagttcagagatgatctaccaaaaaca
aacgtaggtaagattttgcgtcgtgaactgcgtgatgaatataaagcagaagaaaacgca
taa
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