KEGG   Aliivibrio fischeri ES114: VF_1713
Entry
VF_1713           CDS       T00236                                 
Symbol
yoaA
Name
(GenBank) conserved protein with nucleoside triphosphate hydrolase domain
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
vfi  Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:vfi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vfi03400]
    VF_1713 (yoaA)
Enzymes [BR:vfi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     VF_1713 (yoaA)
DNA repair and recombination proteins [BR:vfi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VF_1713 (yoaA)
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AAW86208
UniProt: Q5E438
LinkDB
Position
I:complement(1928642..1930600)
AA seq 652 aa
MIAKIFSSSGALGKAIPGFQPRQPQLDMAHAVHDAIKNGTQLVVEAGTGTGKTFAYLAPA
LVSGKKTIISTGSKNLQEQLFHRDLPLMVSSLGFYGQVALLKGRSNYLCPERLNRQLIES
HTPQADPELLTQLVKVRTWSSETKTGDLGDCEAIAEDSPIIPSITSTNDNCLGKECPSFE
ECFVVKARKKALDADVVVVNHHLFLADLAIKETGFGELIPEADIFIFDEAHQLPDIASQY
FGQSLSSRQLTELAKDIEIGYRTEARDMRQLQKVAERLAGAAMDLRIILGDTSFRGNWRE
AIKSQAVQREILRINDAFELAYDVLKLALGRSQLLDAAFERCTLLKNRLERVCDTTISGY
SYWYECTPRHFSLHITPLSVADKFKEQVAEKEGAWIFTSATLAVNDDFSHFTQRLGLEPT
KQFSLPSPFDYQSQALLCVPRFLPEPNSYGVAPKLVELLEPVIKQNQGRCFFLCTSHQMM
RDLAELFRQTLDLPVLVQGETTKQKLLTEFMELGNALLVATGAFWEGIDVRGDALSCVII
DKLPFTAPDDPLLKARIEDCQLSGGDAFSQVQIPDAVITLKQGVGRLIRDTKDKGVLVIC
DNRLVTRPYGSTFLQSLPPIPRTRDLKKVSEFLAQTNQTEVEQVEQKAILEN
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgattgccaagattttttcgtcatcaggtgcattaggtaaagccattcccggttttcaa
cctcgtcaaccccagttggatatggctcatgctgttcatgatgcaattaaaaatggtact
caattagtcgttgaagccggaactggtacgggtaaaacgttcgcttatcttgcgcctgct
ctggttagtggtaaaaaaaccatcattagtactgggtccaaaaaccttcaagaacaactt
ttccatcgtgatttacccttaatggtgtcatctcttggtttttatggccaagtggctttg
ctaaaaggtcgctcaaattatttgtgtcctgaacgattgaatcgccaattaattgaaagt
catacccctcaagcggatcctgaattactgacgcaattagttaaagtgagaacctggtct
tctgaaaccaaaacgggagatttaggtgactgtgaagcgattgctgaagatagtccaatc
attccttctatcacatcaactaacgataattgtttaggtaaagagtgcccaagttttgaa
gagtgttttgttgttaaggcgcgtaaaaaagcacttgatgcggatgttgtggttgttaac
catcacttatttcttgctgatttggcgattaaagaaacgggatttggtgaattaatcccc
gaggcggatatttttatttttgatgaggcccatcagctacctgatattgcgagccaatat
tttgggcaaagtttatccagtcgccaattaaccgaattagcaaaagacattgaaataggt
tatcgcactgaagcaagagatatgcgtcaattgcaaaaagtggcagaacgcttagctggt
gccgcaatggatttgcgtattattttaggggataccagttttagaggtaattggcgagag
gcgataaaatcacaggctgttcaacgcgaaattttgcgcatcaatgatgcctttgaactt
gcttatgacgtattaaaattggccttaggtcgcagtcaattattagatgccgcttttgag
cgatgcacgttattgaaaaatcgtttagagcgagtatgtgatacgacaataagtggttac
tcatattggtatgaatgtactccaagacattttagtttacatataacaccattgtcggtt
gctgataagtttaaagagcaagtggcagaaaaagagggggcgtggatttttacgtcggca
acgttagcggttaatgatgatttctcgcattttacgcaacgtttggggttagagccgaca
aaacagttttcactgccaagtccatttgattatcaatctcaggctttattgtgcgtacct
cgatttttacctgagccaaatagctatggcgttgctcctaagttggttgaattactggaa
cccgttattaagcaaaaccaaggtcgctgtttctttttatgtacatcacatcaaatgatg
agagacttagctgaactctttaggcaaacacttgatttaccagtattagttcaaggtgaa
accactaagcaaaagttacttacagagtttatggaactgggtaatgcattgttggttgca
actggagctttctgggaaggcattgatgttagaggtgatgccttaagctgtgttatcatt
gataaattaccttttacggcaccggacgatccgctattaaaagcgcgtattgaagattgt
caattaagcggtggggatgccttttctcaagtgcagatccctgatgcggtgataacctta
aaacagggtgttgggcgtcttattcgagataccaaagataaaggggtattggtgatttgt
gacaatcgtttagtgactcgtccttatggctcgacttttttacaaagtttgccaccaata
ccaagaacacgagatttgaagaaagtgtctgaatttttagcacaaacgaatcagacagaa
gtagaacaagtagaacaaaaagccattttagaaaattga

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