Aliivibrio fischeri ES114: VF_1856
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Entry
VF_1856 CDS
T00236
Symbol
flrA
Name
(GenBank) sigma-54-dependent transcriptional activator FlrA
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi02020
Two-component system
vfi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VF_1856 (flrA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VF_1856 (flrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vfi03000
]
VF_1856 (flrA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vfi02035
]
VF_1856 (flrA)
Transcription factors [BR:
vfi03000
]
Prokaryotic type
Helix-turn-helix
Other families
VF_1856 (flrA)
Bacterial motility proteins [BR:
vfi02035
]
Flagellar system
Flagellar assembly proteins
Others
VF_1856 (flrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
Mg_chelatase
AAA_7
bpMoxR
CUE
AAA_22
AAA
TIP49
Motif
Other DBs
NCBI-ProteinID:
AAW86351
UniProt:
Q5E3P5
LinkDB
All DBs
Position
I:complement(2088202..2089683)
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AA seq
493 aa
AA seq
DB search
MQGLAKTLIIEDDAQSRHNLKVILEFIGEHCHAISASELSTFEWSEPWSACFLGQVSDQA
LKDIIKSSLVVHNHIPVIMLAGAMHDVEELTNYVGELNQPVNYPQLTDALRHCQEFMGRR
GLEVPHLGRKNTLFRSMVGQSTAISTVRHLIEQVSGTEASVLVLGESGTGKEVVARNLHY
HSPRRKGPFVPVNCGAIPPDLLESELFGHEKGAFTGAITARKGRFELAQGGTLFLDEIGD
MPMPMQVKLLRVLQERCFERVGGNQSIRADVRIVAATHRNLDEMIEKGTFREDLYYRLNV
FPIEMPALRERKQDIPLLLQELLARMEAEGSTRVRLTPRAVNSLMEHHWPGNVRELANLI
ERLMILFPGESVDVNHLPTKYRYSDIPEFQPENYNQQSIEEQEQAALADMFANFSDGGIP
QQGMQNAGPTSNDLPEDGLNLKEMLAEVEVNMICQALEAQNGVVARAADMLGMRRTTLVE
KMRKYNLNKDDMR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttagcaaagactcttattattgaagatgatgctcagagccgtcataatctt
aaggtgatccttgagtttatcggtgaacattgtcatgccatttcagcttcagaattgtct
acttttgagtggagtgagccatggagtgcttgttttttaggtcaagtttctgaccaagcg
ctgaaagatataatcaaaagttcattagttgtacataatcatattccagtcattatgctt
gcgggggctatgcatgatgttgaggaattgacaaactatgtaggtgaactgaatcaacca
gttaattatcctcaattaaccgatgcgttacgtcattgccaagaatttatgggtcgtcgt
gggttagaagtaccccacctaggccgtaaaaatacgttattccgtagtatggttggacaa
agtacagctattagtactgttcgccatttaattgaacaagtttcaggtacagaagcaagt
gtattggttttgggtgaatcgggtacgggtaaagaagtagttgcacgtaacttgcactat
cattcgccacgccgtaaaggaccatttgttccggttaactgtggtgcaatcccaccagat
cttctagaaagtgaactgtttggccatgagaaaggggcgtttactggtgcaattactgca
cgtaaaggtcgctttgaacttgcgcaaggcggtacgttatttttagatgaaattggtgat
atgccaatgccgatgcaggtgaaattacttcgtgttcttcaagagcgttgttttgagcgt
gtaggcggcaatcaaagtattcgtgcagatgttcgtattgttgctgcgacgcaccgtaat
ttagatgagatgatagagaaaggcacattccgtgaagatctgtattatcgtttaaatgtt
ttcccaattgaaatgccagcattacgtgaacgtaagcaagatattcctttgttgctgcaa
gagttattagcaagaatggaagctgaaggcagtacacgtgtacgactaactcctcgtgcc
gttaactcgttaatggaacaccattggcctggtaacgtacgtgaattagcaaacttaatt
gagcgtttgatgatcttattccctggggaatcggtggacgtaaatcacttaccaacgaag
tatcgttatagtgatattccagagttccaacctgagaattacaatcagcaatcaattgaa
gagcaagaacaagcggcattagctgacatgtttgctaactttagtgatggtggtattcct
caacaaggaatgcaaaacgcaggaccaacatcgaatgatttaccagaagatggtttaaat
ctgaaagagatgttagctgaagttgaagttaatatgatatgccaagcacttgaagcgcaa
aatggtgttgttgcacgagcagctgacatgttaggtatgcgtcgtactactcttgttgag
aaaatgcgtaaatataatttaaataaagatgatatgcgttaa
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