Aliivibrio fischeri ES114: VF_2081
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Entry
VF_2081 CDS
T00236
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfi03009
]
VF_2081 (rumA)
Enzymes [BR:
vfi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
VF_2081 (rumA)
Ribosome biogenesis [BR:
vfi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VF_2081 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
RrnaAD
PCMT
TRM5-TYW2_MTfase
Methyltransf_11
MTS
Methyltransf_23
Cons_hypoth95
Methyltransf_ANTKMT
DOT1
Methyltransf_15
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_4
FtsJ
YGL041W_C
Motif
Other DBs
NCBI-ProteinID:
AAW86576
UniProt:
Q5E320
LinkDB
All DBs
Position
I:complement(2317117..2318466)
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AA seq
449 aa
AA seq
DB search
MELIFVNQAVIMAQFFKPKKKASVNTKHQSVDVVRLDHNGAGIAFVDKKPVFIEGALPGE
KAIIQFIEQKKQFSRAKLIKLAQKSEKRQTPICQHYHECGGCNLQHLQHEEQIVAKNEKL
QELMKKQGVSQGEMVQPIMGEELSYRRRARISLMLNKQTNQLDFGFRKKQSKAIVNVRHC
PVLVQELDQHLESLFTLLNQLKGKKHLGHVELVQADNGSVLLIRHVADFNEKDQQALVNY
CEERNLILYLMPEADVLNHVRGEEPFYLIDGTKIYFTPKDFIQVNRNVNEQMVEQALSWL
DLNENDSVLDLFCGLGNFSLPLAKKVKTVVGIEGVDEMVQRAKLNAERNQLSNVSFYQAN
LEEEVSEQVWASTKFTKILLDPARAGAAGVMETVAKLKPQTVVYVSCNPATLARDSQLLI
QHGFKLTRLGMLDMFPHTGHLESMALFER
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggagctaatttttgtaaaccaggcagtaataatggcgcaattcttcaaaccgaaaaag
aaagcttctgtaaacacaaaacatcaatcagttgatgtggttcgattagatcacaacgga
gctggaattgcttttgttgataagaaacccgtgtttatcgagggagcattgcctggtgaa
aaagcgatcattcagtttattgagcaaaagaaacaattttctcgtgcaaaactgattaag
ctagcgcagaaaagtgaaaaacgccaaacaccgatttgccagcattatcatgaatgtggt
gggtgtaacttacagcatctacaacatgaagaacaaattgtagcgaaaaatgaaaagctg
caagaactgatgaaaaagcaaggtgtctcacaaggtgagatggttcagcctattatgggt
gaggaactgagttaccgccgtcgagctcgcattagcttgatgctcaataaacaaaccaat
cagcttgactttggttttcgtaaaaaacagagcaaagcaattgtaaatgttcgccattgc
cctgttcttgttcaagagttagaccaacatttagagtcattatttactttattaaatcag
ttaaaaggtaaaaagcacctaggtcatgttgagcttgtacaagcagataatggcagtgtt
ttacttattcgtcatgttgcagattttaatgagaaggatcagcaagcgttagttaattat
tgtgaagaacgcaatttaatcctatacctaatgcctgaagcggatgtgttaaatcatgtt
cgtggagaagaaccattttatcttattgatggcaccaaaatttattttacgccgaaagat
ttcattcaagtaaatcgtaatgtgaatgagcaaatggttgagcaagctttatcttggtta
gatttaaatgaaaatgacagcgtattggatctgttttgtgggttaggaaactttagtcta
ccattagctaaaaaagtaaaaacagtggtgggaattgaaggtgttgatgaaatggttcag
cgagcaaaactgaacgcagaaagaaatcaactttctaatgtgtcgttttatcaagctaac
ttagaagaagaggtgagtgaacaagtgtgggctagcacaaagtttacaaaaattttactg
gatcctgctagagcaggggctgcaggtgtgatggaaactgtggcaaaattaaaacctcaa
accgtggtttatgtttcgtgtaacccagcaacacttgcacgcgatagccaattacttatt
caacacggtttcaagctaactaggctaggtatgcttgatatgtttcctcatacagggcat
ttagaatcaatggcattgtttgaacgttaa
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