Aliivibrio fischeri ES114: VF_2114
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Entry
VF_2114 CDS
T00236
Symbol
nfo
Name
(GenBank) endonuclease IV with intrinsic 3'-5' exonuclease activity
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VF_2114 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfi03400
]
VF_2114 (nfo)
Enzymes [BR:
vfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VF_2114 (nfo)
DNA repair and recombination proteins [BR:
vfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VF_2114 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AAW86609
UniProt:
Q5E2Y7
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All DBs
Position
I:complement(2348810..2349481)
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AA seq
223 aa
AA seq
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MKYIGAHVSAAGGVDQAPKRAYQIGANAFALFTKNQRQWVAKPLTKKIISDFKANCKRFG
FSSEQILPHDSYLINLGAPETEKLEKSRAAFIDEMERCHQLGLTLLNFHPGSHLKKISED
ECISLIAESINFAHQAVPDVVAVIENTAGQGTNLGWKFEQLAQIIEQVEDKSRVGICIDT
CHTFAAGYDLSSKEACEHTFAEFERIVGSSNLRGMHINDAKSN
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattggtgcgcatgtatctgctgcaggtggtgttgatcaagcgccaaaacgc
gcttatcaaattggtgctaatgcctttgctttatttacaaaaaaccaacgtcaatgggta
gcaaaaccattaacaaagaaaatcatctctgattttaaggctaactgtaagcgatttggc
tttagtagtgagcaaatactaccgcatgactcatacttaattaatttaggtgcgcctgaa
actgagaagcttgaaaaatcacgagcggcttttattgatgaaatggagcgctgccatcaa
cttggtttaacgttattaaattttcatccaggaagtcatttgaaaaaaatttcagaagat
gaatgtatatctttaattgctgaatcgatcaattttgcacaccaagcggttcccgatgtt
gttgctgttattgaaaatacggcagggcaaggaaccaatttgggatggaaatttgaacaa
ctggctcaaattattgaacaggtcgaagataaatctcgagtagggatttgcattgatact
tgccatacgtttgctgctggatacgatttaagttcaaaagaagcgtgtgaacatactttc
gctgaattcgaacgtattgttggttcttcaaatttacgaggtatgcatatcaatgatgca
aaatcgaattag
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