Aliivibrio fischeri ES114: VF_2178
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Entry
VF_2178 CDS
T00236
Symbol
lpd
Name
(GenBank) lipoamide dehydrogenase, E3 component is part of three enzyme complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00010
Glycolysis / Gluconeogenesis
vfi00020
Citrate cycle (TCA cycle)
vfi00260
Glycine, serine and threonine metabolism
vfi00280
Valine, leucine and isoleucine degradation
vfi00310
Lysine degradation
vfi00380
Tryptophan metabolism
vfi00620
Pyruvate metabolism
vfi00630
Glyoxylate and dicarboxylate metabolism
vfi00640
Propanoate metabolism
vfi00670
One carbon pool by folate
vfi00785
Lipoic acid metabolism
vfi01100
Metabolic pathways
vfi01110
Biosynthesis of secondary metabolites
vfi01120
Microbial metabolism in diverse environments
vfi01200
Carbon metabolism
vfi01210
2-Oxocarboxylic acid metabolism
vfi01240
Biosynthesis of cofactors
Module
vfi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vfi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vfi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vfi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VF_2178 (lpd)
00020 Citrate cycle (TCA cycle)
VF_2178 (lpd)
00620 Pyruvate metabolism
VF_2178 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
VF_2178 (lpd)
00640 Propanoate metabolism
VF_2178 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VF_2178 (lpd)
00280 Valine, leucine and isoleucine degradation
VF_2178 (lpd)
00310 Lysine degradation
VF_2178 (lpd)
00380 Tryptophan metabolism
VF_2178 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VF_2178 (lpd)
00670 One carbon pool by folate
VF_2178 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vfi04147
]
VF_2178 (lpd)
Enzymes [BR:
vfi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
VF_2178 (lpd)
Exosome [BR:
vfi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
VF_2178 (lpd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
AlaDh_PNT_C
FAD_binding_2
NAD_binding_8
HI0933_like
FAD_binding_3
Thi4
DAO
Motif
Other DBs
NCBI-ProteinID:
AAW86673
UniProt:
Q5E2S3
LinkDB
All DBs
Position
I:complement(2447230..2448657)
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AA seq
475 aa
AA seq
DB search
MSKQVKAQVVVLGSGPAGYSAAFRCADLGLETVLIERYSTLGGVCLNVGCIPSKALLHVS
KVIEEAKAMAEHGVVFGEPQTDINKIRIWKDKVVTQLTGGLGGMAKMRNVTVVNGYGKFT
GPNTIEVEGEENTTVTFDNAIIAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPEKLLIM
GGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVYTKRIKDKFKLMLETKVTAV
EAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGKLIDAEKAGIEVDERGFINVDKQM
RTNVAHIHAIGDVVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVG
KTEKEAKEEGLNFEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGEL
LGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNKKAVKKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaagttaaagcccaagtagttgtacttggttcaggtcctgctggttactct
gctgctttccgttgcgcagatttaggtctagaaacagtattaatcgagcgttacagcact
cttggtggtgtatgtctaaacgtgggttgtattccatcgaaagctcttcttcacgtatct
aaagtaatcgaagaagcaaaagcaatggctgaacacggtgttgtttttggtgaaccacaa
actgatattaacaagatccgtatctggaaagataaagttgtaactcaactgaccggcggt
cttggtggtatggctaagatgcgtaacgttactgtagtaaatggctacggtaaatttaca
ggccctaacacaatcgaagttgaaggcgaagaaaacacaacagttacttttgataacgct
atcattgcagctggttctcgtccgattaaacttccgttcattccgcatgaagacccacgt
atttgggattcaactgatgcgctagaattaaaagaagtaccagaaaaattattgatcatg
ggcggtggtatcatcggtcttgaaatgggtacggtttaccactctttaggttctaaagtt
gaagtggttgagatgtttgatcaagttatcccagcagctgataaagacatcgttaaagta
tacacaaaacgcattaaagacaaattcaagctaatgcttgagacaaaagtaacagcagtt
gaagcaaaagaagacggtatctatgtttcaatggaaggcaaaaaagcaccagctgaagct
gagcgttacgatgcagttcttgttgctatcggtcgtgtaccaaacggtaaacttatcgat
gctgaaaaagcaggtatcgaagttgatgagcgtggtttcatcaatgttgataagcaaatg
cgtactaacgttgctcacattcatgcgatcggtgatgttgttggtcaaccaatgcttgct
cacaaaggtgtgcatgaaggtcacgtagcggctgaagttatttctggtaagaagcactac
ttcgatcctaaagtaattccttcaattgcttacactgagccagaagttgcttgggttggt
aaaactgagaaagaagcaaaagaagaaggtctaaactttgaagttgcaactttcccatgg
gctgcatcaggtcgtgcaatcgcatctgattgtgctgatggtatgactaagcttatcttt
gataaagaaactcaccgtgtaattggtggtgctatcgttggtactaacggtggtgagcta
cttggtgaaatcggcctagcaatcgaaatgggttgtgacgcagaagatatcgctcttact
atccacgctcacccaactctacatgagtctgtgggtctagctgcggaagtatttgaaggt
tcaatcactgaccttccaaacaaaaaagcagttaaaaagaaaaaataa
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