Aliivibrio fischeri ES114: VF_2203
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Entry
VF_2203 CDS
T00236
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00470
D-Amino acid metabolism
vfi00550
Peptidoglycan biosynthesis
vfi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VF_2203 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VF_2203 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfi01011
]
VF_2203 (murD)
Enzymes [BR:
vfi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VF_2203 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vfi01011
]
Precursor biosynthesis
Amino acid ligase
VF_2203 (murD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AAW86698
UniProt:
Q5E2P8
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Position
I:complement(2474898..2476112)
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AA seq
404 aa
AA seq
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MIDTRDTPPGHDQLPENVELHSGGWQQDWLINADLIVTNPGIALASPQLKPAIDKGIKIV
GDIELFAWAVNAPVIAITGSNGKSTVTDLTGEMAKAAGVKTAVGGNIGFAALDLLEQDAE
LYVLELSSFQLETTSTLKLKAAAFLNLSEDHMDRYQGMADYRQAKLRIFEHAEVCIVNRD
DKQTYPDVEKTLKSFGFDQGDYGCIEKDGIEYLAKNTVPLLAANELGLVGKHNIANSLVA
IALLDAAGINLDATLDTLRTYNGLTHRCQVVADNNGIRWVNDSKATNVASTLAALSGLQL
EGKLHLLVGGVGKGADFSELSPALHDLNLMMYCFGEDGDQFVSLDPRSLLCETMNEAIAT
LYPTLNKGDMVMLSPACASFDQYANFMARGDAFTQLAKQYSIES
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatactcgtgatacaccgccaggccatgaccaattgcctgaaaatgtagaactg
cattctggaggatggcaacaagattggctgattaacgctgatctgattgtcacgaatcct
ggaatcgccttagcgtcacctcaacttaaacctgctattgataaaggaattaaaattgtt
ggtgacatcgagttatttgcttgggcagtgaatgcacctgttattgcgatcaccgggtct
aatggcaaaagtacggtgactgatttaactggggaaatggcaaaagcggctggagtaaaa
acagccgttggtggaaacattggttttgctgctcttgatttactagagcaagatgcggag
ctttatgttcttgagctttcgagtttccaacttgaaacaacatccacattaaagctgaaa
gccgctgcctttcttaatttgtctgaagatcatatggatcgttatcaaggtatggcggat
tatcgccaagctaagctacgtatctttgagcatgccgaagtatgtattgttaatcgtgac
gataaacaaacttatcctgacgttgaaaaaacattaaaaagctttgggtttgaccaaggc
gattatggctgtattgaaaaagatggcattgagtatttagctaaaaatacagtgccattg
cttgctgcaaatgaattaggcttagtcggaaagcacaatattgcaaatagcctagttgca
attgcattacttgatgccgctggtatcaatttagatgcaacactagatacattaagaact
tacaatggattgacacatagatgccaagttgtcgcagataataatggtattcgctgggtc
aatgattcaaaagcgacaaacgtagcaagtacattggcagccttatctggtttacaactt
gaaggtaaattacacctacttgttggtggtgtaggcaaaggtgctgatttttcagaatta
tcaccagcgctgcatgatttaaatttaatgatgtattgctttggtgaagatggcgaccaa
tttgtatcacttgatcctcgttcactcttatgtgaaaccatgaatgaagccatcgctact
ctatacccgactttaaataaaggcgatatggtgatgctatctccagcatgtgcaagcttc
gaccaatacgcaaattttatggctagaggggatgcattcacccagttagcaaaacagtat
tcaattgagagttaa
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