Aliivibrio fischeri ES114: VF_2274
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Entry
VF_2274 CDS
T00236
Symbol
priA
Name
(GenBank) Primosome factor n' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VF_2274 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfi03400
]
VF_2274 (priA)
Enzymes [BR:
vfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VF_2274 (priA)
DNA repair and recombination proteins [BR:
vfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VF_2274 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
AAA_19
Zot
AAA_22
TrwB_AAD_bind
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AAW86769
UniProt:
Q5E2H7
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All DBs
Position
I:2555471..2557684
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AA seq
737 aa
AA seq
DB search
MMLTMPYSIAHVALPVPLDRTFDYLIKSEQKPVIGGRVKVPFGRQRLIGVVTKLSNESEF
AREKLKAIDVVIDEQSLWPTNLYKLLNWSSTYYQYPLGDTLANAMPSWLRKGREANFASL
KAWQITELGKNQDLNKLTRAPKQAKALNLVRHQQCSHEQMLEEEVTAATLKTISDKGWIK
EVSLAPTPSYWYRDVEVTQEKPQLNEEQSIAIATVNANPEFGCYLLEGVTGSGKTEVYLQ
LLEPILKAGRQALILVPEIGLTPQTINRFKRRFNVPVDVIHSGLNDTERLNAWLAARDNH
AGIIIGTRSALFTPFHDLGIIIVDEEHDASYKQQDSMRYHARDLAVMRANLDNIPIILGS
ATPALETLHNANVGKYHHLTLTKRAGTAIPARHGVLDVKGLYLNSGLSAPLIAQMRKHLS
EGNQVMLFLNRRGFSPALMCHECGWMAECKRCDAFYTFHQHSNEIRCHHCGSQQPIIHQC
QGCGSTQLISVGVGTEQLETQLTNLFPEYKTVRIDRDSTRRKGSLEDYLEAIKNNEYQIL
IGTQMLAKGHHFPNVTLVGLIDVDSSLFSSDFRAPERLAQLFIQVAGRAGRASKPGEVIL
QTHHPEHSLLQSLLHHGYGHFAEHALKERKFAQLPPYTHLSLFRAEANNNENVEQFLRQV
RDILESHPQFHDATPVLGPIPAPLARRAGKYRWQLLFQAPNRTVMQSMLRGAKTAIELLP
LAKKVRWTLDIEPQDLS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaaccatgccctattcaatcgctcatgttgcactgcctgttccacttgatcgc
acctttgattatcttattaaatcagagcaaaaacctgtgatcggtggacgagtaaaagtc
ccttttgggcgtcagcgtttaattggtgtggtaacaaaactcagcaatgaatctgagttt
gctcgtgagaaattaaaagccatcgatgttgtcattgatgaacaaagcttatggcctacc
aatttatacaaattattaaattggagcagtacgtattatcagtatccattaggagacacc
ttagcgaatgcaatgccttcatggcttagaaaaggaagagaagccaattttgcttcgtta
aaagcttggcaaattaccgagctaggtaagaatcaagatttaaataagctaacccgagcg
ccaaaacaagccaaagcactcaatttagtaagacatcaacaatgcagccatgagcaaatg
cttgaagaagaagtgactgcagccacactaaaaacgatttcagataaaggttggattaaa
gaggtatctctcgctccgacaccaagctattggtatcgagatgttgaagtcactcaagaa
aaacctcaactcaatgaagagcaatctatcgctattgctacggtcaatgcgaatcctgaa
tttggttgttatctattggaaggggttacgggctcaggaaagactgaagtctatttacaa
cttctagaaccaattttaaaagcgggacgacaagcgcttatcttggttcctgaaattggt
ttaacgccgcaaaccattaatcgttttaagcgtcgctttaatgtacctgttgatgttatt
cactcaggacttaatgacactgagcgtttaaatgcatggctagcagcaagagataatcac
gccggtatcatcattggtactcgttcggctctgtttacgccttttcatgatttagggatc
atcattgttgatgaagaacatgatgcctcttataagcaacaagacagcatgagatatcat
gcccgcgatttagccgtgatgagagccaacttagataacatccctattattctaggctca
gcaacgccagcgttagaaacattacacaatgcgaatgttgggaaatatcatcatctaaca
ctaaccaaacgcgcaggtactgccattccggctcgtcatggtgttcttgatgtaaaaggc
ttatatcttaatagcggtctatcagcaccattaattgctcagatgagaaaacacttatct
gaaggcaatcaggttatgctgtttttaaaccgcagaggcttttcaccagcactaatgtgc
catgaatgtggttggatggcagaatgtaaacgttgtgatgcgttctatactttccaccaa
cactctaatgaaattcgttgtcaccactgtggttcacagcagccaattatccatcaatgt
cagggatgcggatcgacgcagttaatttctgtcggtgtaggtacagaacaactagaaaca
caattaaccaatctatttcctgaatacaaaacggttcgtattgatagagatagcacccgt
cgtaaaggtagcttagaagactatttagaagcgattaagaataatgaataccaaatttta
attggtactcaaatgctagcaaaaggccaccactttcctaacgtgactttggttgggtta
atcgacgtagacagctctctgtttagtagtgattttcgagcgcctgaaagattagctcaa
ttatttattcaggttgcaggacgtgcagggcgtgcaagtaaaccaggtgaggtaattctg
caaactcatcatccagaacactctttattacaaagtttattacatcatggttatgggcat
tttgcagagcacgctttaaaagagcgtaaatttgctcaattaccaccttatacccatttg
tctctttttagagctgaagcaaataataacgaaaacgtggaacaattcttacgacaagtg
cgtgatattttagaaagccacccacaatttcatgatgcaacaccagtacttgggccgatc
cctgccccattagctcgtcgcgccggtaaatatcgttggcagctattgttccaggctcca
aaccggacagtaatgcaatcaatgcttcgcggtgcaaaaaccgccattgaacttttaccc
ctagcaaaaaaagttcgatggactttagatattgagccacaagatttaagttaa
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