Aliivibrio fischeri ES114: VF_2436
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Entry
VF_2436 CDS
T00236
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfi03016
]
VF_2436 (trmA)
Enzymes [BR:
vfi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
VF_2436 (trmA)
Transfer RNA biogenesis [BR:
vfi03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
VF_2436 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_15
Methyltransf_4
MTS
Methyltransf_11
Methyltransf_31
Cons_hypoth95
PrmA
Methyltransf_12
DREV
Motif
Other DBs
NCBI-ProteinID:
AAW86931
UniProt:
Q5E215
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All DBs
Position
I:2736443..2737549
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AA seq
368 aa
AA seq
DB search
MTQSVMNPENYQVQLDEKAEALSAMFSEFNVPELEVFSSPAENYRMRAEFRVWHEGDEMY
YVMFNQETKEKYRVDYFLPASRLINDLMPLLTEAVKESKTLRYKMFQVDFLSTLSGEILV
SMLYHRQLDDAWKEEAKALKQRLNDEGFNLNIIGRARKMKIVLDQEFVIEKLKVNDDILT
YKQVENSFTQPNGIVAQKMLEWAVDCTQNSQGDLLELYCGNGNFSLALAKNFDRVLATEL
AKPSVDSAQYNIAANNIDNVQIIRMSAEDFTDAMEGKREFRRLKDQNIDLKSYNCNTIFV
DPPRSGMDEGTCKMVQGYERIMYISCNPETLKENLEILSQTHNITRFALFDQFPYTHHME
AGVFLERK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacacaatcagtcatgaacccagaaaattatcaagtacagttagatgaaaaagcagaa
gcactctctgctatgttttctgaatttaatgttccagaactagaagtcttttcctctcct
gctgaaaactaccgcatgcgtgctgaatttcgtgtgtggcatgaaggtgacgaaatgtat
tacgtcatgttcaaccaagaaaccaaagaaaaataccgtgttgattacttcttacctgca
agccgtttaattaacgatttgatgccattactaacagaagcagtaaaagagagtaaaaca
cttcgctataaaatgttccaagtggatttcttatcaacccttagtggcgaaattttggtg
tcgatgctttatcaccgtcaactagatgatgcttggaaagaagaagcgaaagcattaaaa
caacgtctgaatgatgaaggttttaacctaaatatcattggtcgtgcacgtaaaatgaaa
atcgttttagaccaagagtttgttattgaaaaacttaaagttaatgacgacatcttaacg
tataagcaagttgagaatagctttacacaaccaaacggcattgttgctcaaaaaatgctg
gaatgggcagtggattgtacacaaaacagtcaaggcgacctacttgaattatattgtggt
aacggtaacttctcattggcattagcgaaaaactttgatcgtgttttagcaaccgaatta
gctaaaccatctgttgattctgctcaatacaacattgcagcaaataacattgataatgta
caaatcattcgaatgtcagctgaagattttactgatgctatggaaggtaaacgtgaattt
agacgcttaaaagatcaaaacatcgatttaaaaagctataactgcaacactatctttgtt
gatccacctcgttctggaatggatgaagggacttgtaagatggttcaaggttacgagcgt
attatgtacatctcttgtaatcctgaaacgctaaaagaaaacttagaaattttaagccaa
acacacaacattacgcgttttgctttatttgaccagttcccatacacacaccatatggaa
gcaggcgttttcttagaaagaaaataa
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