KEGG   Aliivibrio fischeri ES114: VF_2484
Entry
VF_2484           CDS       T00236                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vfi  Aliivibrio fischeri ES114
Pathway
vfi00300  Lysine biosynthesis
vfi00470  D-Amino acid metabolism
vfi01100  Metabolic pathways
vfi01110  Biosynthesis of secondary metabolites
vfi01120  Microbial metabolism in diverse environments
vfi01230  Biosynthesis of amino acids
Module
vfi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vfi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    VF_2484 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VF_2484 (dapF)
Enzymes [BR:vfi01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     VF_2484 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AAW86979
UniProt: Q5E1W7
LinkDB
Position
I:complement(2784138..2784968)
AA seq 276 aa
MHFHFSKMHGLGNDFMVVDCLTQNIFFSPDLIRRLADRHRGIGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKTSISVSTKKGKMILKVEDDDQITVNM
GEPVFEPNKIPFKATQAEKTYLLRVDDKTLFSGAVSMGNPHCVTVVDDVDAYDVDKYGQL
VESHERFPERVNAGFMQIISPNEVKLRVYERGAGETQACGSGACGAVAVGIMQELLGEEV
KVSLPGGDLHIVWQGPGKPLFMTGPATHVYDGQLSI
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcactttcatttttctaaaatgcacgggctaggcaacgactttatggttgttgactgt
ctgacacagaatattttcttttctccagacctgatccgtcgtttggctgatcgccatcgt
ggtattggatttgatcagttattggtggttgaagccccttatgatcctgaaacggatttt
cattaccgaatttttaatgctgacggctcggaagtagagcagtgtggtaatggtgcacgt
tgtttcgctcgatttgtacgaatgaaagggttaaccaataaaaccagcatttcggtcagt
actaagaaaggcaaaatgattttaaaagtggaagatgatgatcaaattacggtgaacatg
ggtgagcctgtatttgagccaaataagattccatttaaagcaacgcaagctgaaaaaacg
tatttattgcgtgttgatgataaaaccttattcagtggcgcagtaagtatgggaaatcct
cactgtgtgaccgttgtcgatgatgttgatgcttatgatgttgataagtatgggcagtta
gtggaaagccatgaacgctttcctgagcgtgtaaatgccggctttatgcaaatcatctca
ccaaatgaagtgaaattacgtgtttatgaacgtggtgctggtgaaactcaagcttgtggt
agcggtgcttgtggtgcggttgctgtaggtattatgcaagaattattgggtgaggaagtg
aaagtgtctttacctggtggtgatttgcacatcgtatggcaaggaccaggaaaaccatta
tttatgacaggccctgcaacacacgtatacgatggtcaattatcaatatga

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