Aliivibrio fischeri ES114: VF_2484
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Entry
VF_2484 CDS
T00236
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00300
Lysine biosynthesis
vfi00470
D-Amino acid metabolism
vfi01100
Metabolic pathways
vfi01110
Biosynthesis of secondary metabolites
vfi01120
Microbial metabolism in diverse environments
vfi01230
Biosynthesis of amino acids
Module
vfi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VF_2484 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VF_2484 (dapF)
Enzymes [BR:
vfi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VF_2484 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AAW86979
UniProt:
Q5E1W7
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All DBs
Position
I:complement(2784138..2784968)
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCLTQNIFFSPDLIRRLADRHRGIGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKTSISVSTKKGKMILKVEDDDQITVNM
GEPVFEPNKIPFKATQAEKTYLLRVDDKTLFSGAVSMGNPHCVTVVDDVDAYDVDKYGQL
VESHERFPERVNAGFMQIISPNEVKLRVYERGAGETQACGSGACGAVAVGIMQELLGEEV
KVSLPGGDLHIVWQGPGKPLFMTGPATHVYDGQLSI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcactttcatttttctaaaatgcacgggctaggcaacgactttatggttgttgactgt
ctgacacagaatattttcttttctccagacctgatccgtcgtttggctgatcgccatcgt
ggtattggatttgatcagttattggtggttgaagccccttatgatcctgaaacggatttt
cattaccgaatttttaatgctgacggctcggaagtagagcagtgtggtaatggtgcacgt
tgtttcgctcgatttgtacgaatgaaagggttaaccaataaaaccagcatttcggtcagt
actaagaaaggcaaaatgattttaaaagtggaagatgatgatcaaattacggtgaacatg
ggtgagcctgtatttgagccaaataagattccatttaaagcaacgcaagctgaaaaaacg
tatttattgcgtgttgatgataaaaccttattcagtggcgcagtaagtatgggaaatcct
cactgtgtgaccgttgtcgatgatgttgatgcttatgatgttgataagtatgggcagtta
gtggaaagccatgaacgctttcctgagcgtgtaaatgccggctttatgcaaatcatctca
ccaaatgaagtgaaattacgtgtttatgaacgtggtgctggtgaaactcaagcttgtggt
agcggtgcttgtggtgcggttgctgtaggtattatgcaagaattattgggtgaggaagtg
aaagtgtctttacctggtggtgatttgcacatcgtatggcaaggaccaggaaaaccatta
tttatgacaggccctgcaacacacgtatacgatggtcaattatcaatatga
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