Aliivibrio fischeri ES114: VF_2536
Help
Entry
VF_2536 CDS
T00236
Symbol
rimN
Name
(GenBank) predicted ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfi03009
]
VF_2536 (rimN)
03016 Transfer RNA biogenesis [BR:
vfi03016
]
VF_2536 (rimN)
Enzymes [BR:
vfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
VF_2536 (rimN)
Ribosome biogenesis [BR:
vfi03009
]
Prokaryotic type
Other maturation factors
VF_2536 (rimN)
Transfer RNA biogenesis [BR:
vfi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VF_2536 (rimN)
Prokaryotic type
VF_2536 (rimN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
AAW87031
UniProt:
Q5E1R5
LinkDB
All DBs
Position
I:complement(2857483..2858040)
Genome browser
AA seq
185 aa
AA seq
DB search
MKNLNQVVDALKQGNVIAYPTEGVFGVGCDPDNEQALLNLLDVKKRPKEKGLILIAASIE
QLLPYIDLEQLTEEQVNTIKASWPGPVTWIVPVKTSTLPLVTGQFDSIAVRVTAHPQVKA
ICNAFGKPITSTSANLSGLEPCRSVTEVEAQLGDTGVVIFQGEVGNRTQPTEIRDAKTGN
TLRQG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaatctaaatcaagtcgtagacgccttgaagcaagggaatgttatcgcttatcca
acagaaggcgtttttggtgttggttgcgatcctgataacgaacaagcgttactaaattta
ttggatgtaaaaaagagaccaaaagaaaaaggactaattttgattgctgcatctatagag
caattattaccttatatcgatttagaacaattaacagaagagcaagtaaataccattaaa
gcatcatggcctggtcctgtgacttggattgttccagtgaaaacaagcacattaccttta
gttactgggcaatttgatagtattgctgtcagagtaacagctcatcctcaagtgaaagct
atttgtaacgcattcggtaaaccaattacttcaacgagtgctaacctttcaggattggaa
ccttgtcgaagtgtcactgaagttgaagctcaattaggggatacgggggtagttattttt
caaggtgaagtaggtaatcggactcagcctactgaaattcgtgatgcgaaaacaggtaat
acgctgcgtcagggataa
DBGET
integrated database retrieval system
