Aliivibrio fischeri ES114: VF_2539
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Entry
VF_2539 CDS
T00236
Symbol
yrdD
Name
(GenBank) predicted DNA topoisomerase
KO
K07479
putative DNA topoisomerase
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
VF_2539 (yrdD)
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Motif
Pfam:
Zn_ribbon_Top1
CoiA_N
Zn_ribbon_InsA
Zn_ribbon_8
DUF7340
DUF1272
Zn_ribbon_FGT1_2
Zn_ribbon_19
Motif
Other DBs
NCBI-ProteinID:
AAW87034
UniProt:
Q5E1R2
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Position
I:complement(2859878..2860447)
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AA seq
189 aa
AA seq
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MSGKIDKELFQAHEHALEHEICPQCSGELSIRYGKRGPFLGCQNYPECDYIRPLKSNDGH
VVKELGIPCPQCESELVLRQGRYGMFVGCSAYPSCTHIESLEQKKESSQTETVCPSCHKG
HLQEKQSRFGKSFYACDAYPACRFAVNLEPQQGCCQKCGFELLLKKETAAGTRLICADKK
CAEVQSQSE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaagattgataaagaattatttcaagcgcatgagcatgcgttagagcatgaa
atatgccctcaatgtagcggtgaactaagtatccgttatggaaaaagaggtccattttta
ggctgtcaaaattaccctgaatgtgactatattcgtccattaaaaagtaatgatggtcat
gtagtgaaagagttagggatcccatgccctcaatgtgaaagtgaattggtgttgagacaa
ggtcgatatggaatgtttgtcggttgttctgcatatccatcatgtactcatattgaatct
ttagaacaaaagaaagagtcgtcgcagacagaaacggtttgccctagttgtcataaagga
catctacaagagaaacaatctcgttttggtaaatcattttacgcatgtgatgcttaccct
gcttgtcgttttgcggttaatttagagccacagcaagggtgttgtcaaaaatgtggtttt
gagttgcttttaaaaaaagaaacagcggcaggaactcgtttaatctgtgcagataaaaaa
tgtgcagaagttcagagccaatcagagtaa
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