Aliivibrio fischeri ES114: VF_2545
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Entry
VF_2545 CDS
T00236
Symbol
rsmB
Name
(GenBank) 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfi03009
]
VF_2545 (rsmB)
Enzymes [BR:
vfi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
VF_2545 (rsmB)
Ribosome biogenesis [BR:
vfi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VF_2545 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Methyltransf_25
Methyltransf_31
Methyltransf_37
Methyltransf_5
MTS
Cons_hypoth95
Methyltransf_15
TrkA_N
TRM5-TYW2_MTfase
SH2_1
Motif
Other DBs
NCBI-ProteinID:
AAW87040
UniProt:
Q5E1Q6
LinkDB
All DBs
Position
I:2864822..2866102
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AA seq
426 aa
AA seq
DB search
MNVRAAAAKVIYQVVDQGHSLSSALPKAQSEIKPRDQALLQEICYGVLRFLPRLESVAQS
LMDKPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVAETVEGTKNLKGPKLRGLINAVLRN
YQRSQEELDAKSVSHDSGKYGHPGWLLKMLQQAYPEQWENIVEANNSKAPMWLRVNSQHH
TRDEYIALLEKEEISVTPHSQATDALLLDKARDVYTLPGFEQGWVSVQDAAAQLSAEYLQ
PQNGELILDCCAAPGGKTAHILERTQDTSVVAIDCDETRLKRVYENLERLNLKAQVICGD
ARHPEEWWKGEQFDRILLDAPCSATGVIRRHPDIKWLRRSEDIKALAELQSEIFDAMWLQ
LKSGGTMVYATCSITPLENCDQVKAFLARTSDATLIDNTDPEKPGRQILPGEENMDGFYY
AVLQKA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcgtgctgcggcagccaaagttatttatcaagttgtcgatcagggtcattct
ctctcttcagcgcttccaaaagctcaatctgagatcaaacctcgtgaccaagctttactg
caagagatctgctatggcgtactgcgctttcttcctcgtttagagtctgttgctcaatca
ttaatggataaaccattaaagggaaaacaacgagtattccatcatctaattcttgtgggt
atttaccaactgagtttcatgcgtattcctgcacacgcagcagtagcggaaaccgttgaa
ggtacaaagaatttaaaaggtccaaaactacgcggactgatcaacgcggtattacgtaat
tatcaacgtagccaagaagagttggatgcgaaatcagtaagccatgactcaggaaaatat
ggtcatccgggctggttattgaaaatgctacaacaagcttacccagaacaatgggaaaat
attgttgaagccaataacagtaaagcaccaatgtggttacgtgttaatagccaacaccac
actcgcgatgaatatatagctctacttgaaaaagaagagatcagtgttacgccacacagc
caagcgacggatgctctgttattagataaagcgcgtgatgtatatacacttcctggcttt
gagcaaggttgggtatcagtacaagatgctgctgctcaattatcagcagagtacctacaa
cctcaaaatggcgaattaattcttgattgctgtgctgctcctggtggtaaaacagcgcac
attctagaacgcacacaagatacaagtgtggttgccattgattgtgatgaaacacgttta
aaacgagtttatgaaaacttagaacgcttaaaccttaaagcacaagttatttgtggtgat
gctcgccatccagaagaatggtggaaaggcgaacaatttgaccgcattttattggacgca
ccttgttctgcaacaggggttattcgtcgtcacccagacatcaagtggttacgtcgttca
gaagacattaaagcactggctgaactgcaaagtgaaatctttgatgctatgtggttacag
ttaaagtctggcggcaccatggtttatgcgacttgttcaattacgcctttagaaaactgc
gatcaggtaaaagcgtttttagcacgaacaagtgatgcaacattaattgataatacagat
cctgaaaaaccaggacgtcaaattcttccaggtgaagagaatatggacggcttctactac
gctgttctacaaaaagcctaa
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