Aliivibrio fischeri ES114: VF_A0251
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Entry
VF_A0251 CDS
T00236
Symbol
fdhF
Name
(GenBank) formate dehydrogenase-H
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00630
Glyoxylate and dicarboxylate metabolism
vfi00680
Methane metabolism
vfi01100
Metabolic pathways
vfi01120
Microbial metabolism in diverse environments
vfi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VF_A0251 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
VF_A0251 (fdhF)
Enzymes [BR:
vfi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
VF_A0251 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Pyr_redox_2
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
Fer4_7
NAD_binding_8
Fer4_6
Fer4
Fer4_8
Fer4_10
DAO
Fer4_2
Fer4_9
FAD_oxidored
HI0933_like
FAD_binding_2
Fer4_15
NAD_binding_7
Thi4
Amino_oxidase
Fer4_21
NADH-G_4Fe-4S_3
Lys_Orn_oxgnase
Fer4_3
Fer4_4
Fer4_16
Fer4_18
FAD_binding_3
Fes1
Motif
Other DBs
NCBI-ProteinID:
AAW87321
UniProt:
Q5E0X5
LinkDB
All DBs
Position
II:279815..283978
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AA seq
1387 aa
AA seq
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MMKITIDKQTFTIDEEITLLAAAKECNVEIPSLCGNNINGEKVPCDLCVVEIEGQGIQRA
CETQAVDGMQVITSSEALVKRRQSALNKILSDHYADCEAPCQTACPAGVDIQSYLYHISQ
DNHQKAIEVIKRTLPMPLSIGRVCPAFCEAECRRGLVDEPLAIRQLKRHAADVDLHAQES
YVPPKKADKGKSIAVIGSGPGGLTCGYYLTNEGYSVTVFESMPKAGGWLRYGIPEYRLPK
SILDKEIELMCRNGMEIQTSVKLGEDFSLTQLSDEYDAVCLAVGASKAVEMHYQGSELGG
CYLGVDYLKDYVTESKLTTGKKVAVIGGGNTAIDCARTAVRDGADTTLIYRRTREEMPAE
DYEVVEAEHEGVKFHFLTNPVENIADENGRVAQVRLEKMALGEPDASGRRSPQATGEFFI
EEFDTVISAVSQKPDLSFLENDTIDLPLTRWNTADANSLTMHSGVKNIFSIGDFRRGPAT
AIEAVADGRIAAEAIDRFFNGDMEKIPTKPFNSQKEKKTKQVDPKHFEHIQKAMRVIMPE
LTAEQREQSFDEVETGFDNLDAIREAERCLECACQANTNCGLRDYATEYKADETDLSNES
KQKFAIDTSSEFIVFDANRCISCGQCVEACNEKGVHGVLSFMKNEDGTNASRPECRAGFE
HGYQMGNSNCVQCGACVQACPVGALVDSRDKSQGRIEVLKPVDTICTYCGVGCKLTMMVD
ESTNKIKYVQGAKSSPVNEGMLCVKGRFGFDFVSSDERLKTPLIRKNGELVPASWEEAIT
LVADKFSTIKSQHGGNALAGFSSAKTTNEDNYAFQKLVRREFETNNLDHCARLCHSTTVT
GLEASIGSGAMTNDIPSIKHSDLIFIIGSDTTSAHPIIASHIKQATRHHGARLIVADPKQ
VDISDHAELYVAQRPGTDVMLLNGIMQQIIKNNWHDQAYIAERVEGFDELKAEVMSEAYS
PEKIELITGVKAQDVIEMARYIGTAKRTAIYYSMGITQHTTGHDNVRSIANLQMLCGNIG
IEGGGINPLRGQSNVQGACDMGALPTDFPGYQKVENPAVYEKFVKAWNKPTLPSKKGLTL
TEIIDAACHEQVKGLFVMGENPVLSDPDQAHVIHGLEKLDFLVVQDIFMTETAAYADVIL
PSCSFAEKAGHFTNTERRVQRISPAVNPPGEAKEDWWIIQEIANAMGGEWNYQSVEDITE
EITQVTPQYQGMHWDAIGKNGLQWPCNDANPQGTRIMHNQQFLRGKGQMAAVPFRYAAEL
PDEEYPLVLTTGRLLEQYHTGTMTRKTKGLNNLAGPRAMMSVADAERLGISNSEMVRVST
RRGTIEAPAFVTKRMQEGVIFVPFHFVEAAANKLTTTALDPHAKIPEFKVAAVKVEKVLQ
PEPEVCV
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaataactatagataaacaaacattcactatcgatgaagagataacactttta
gcagctgcaaaggaatgcaatgtcgaaatcccttcactatgcggaaacaatatcaatggt
gagaaagtaccatgtgatttatgcgtagttgaaattgaaggtcaaggaattcaacgagct
tgtgaaactcaagcggttgatggtatgcaagtgatcacttcgtctgaagcgttagtaaaa
cgtcgtcaaagtgcattaaataaaattctttctgatcattacgctgattgtgaagcgcca
tgccaaactgcgtgcccagcgggcgtagatatacagtcgtatctgtaccacatttcacaa
gataatcatcaaaaagccattgaggtcattaaacgaacattgccaatgccattatctatt
ggtcgtgtttgtcctgcgttctgtgaagcggaatgtcgtcgtggtttggttgatgagcca
ttagctattcgtcagttaaagcgtcatgcggctgacgtggacttgcatgctcaagaatct
tacgtaccaccaaagaaggcagataaaggtaaatccattgctgtgattggcagtggtccg
ggtggattaacctgtggttattatctgactaatgagggttacagtgtaacggtgtttgaa
tcgatgcctaaagctggcggttggctacgctatggtattcctgaatatcgtttaccaaag
tcgattttagataaagaaatcgaattaatgtgccgcaacggtatggaaattcaaacgtct
gtgaaactaggtgaggatttctcattaacacagctaagtgatgagtatgacgcagtctgt
ttagcggtcggtgcttcaaaagccgttgaaatgcattatcaaggcagtgagcttggtggt
tgttatttaggtgttgattacctaaaagattacgtaactgaatctaaattaacaacaggt
aaaaaagtagcggttattggtggtggcaacacggcgattgactgtgctcgtacagcggtg
cgtgatggtgctgatactactttgatttatcgccgtactcgtgaagagatgccagcagaa
gattatgaagtggttgaagctgaacatgaaggtgttaagttccattttttaactaaccct
gttgaaaatattgctgatgaaaatggacgagtagctcaagttcgtttggagaaaatggca
ttaggtgaacctgatgcgtctggtcgtcgtagtcctcaggcaaccggtgaatttttcatt
gaagagtttgataccgtgatttctgcggtatcacaaaaaccggatttaagctttttagag
aacgatacgattgatttgccactgactcgttggaataccgctgacgcaaacagtttgaca
atgcacagtggtgtgaaaaatatttttagcatcggtgatttccgtcgtggtcctgcaacg
gcgattgaagcggttgctgatggtcgtattgctgcagaagcgattgatcgtttctttaac
ggtgacatggagaaaatcccaactaaaccgtttaattctcaaaaagagaagaagactaag
caagttgatcctaagcattttgaacatatccaaaaagcaatgcgtgtcatcatgcctgag
ttaacggcagagcaacgtgaacaaagctttgatgaagttgaaactggctttgataacttg
gatgcaatacgtgaagctgagcgttgcttagagtgtgcatgtcaggcaaatactaattgt
ggactgcgtgattacgcaacggaatataaagcggatgaaacggatttaagcaacgaaagt
aaacagaagtttgctatcgataccagctctgaattcatcgtgtttgatgccaaccgttgt
attagttgtggtcaatgtgttgaagcgtgtaacgaaaaaggtgtgcatggtgtattaagc
ttcatgaaaaatgaagatggaaccaatgcctctcgtccggaatgtcgtgcagggtttgag
cacggttatcaaatgggtaactcaaactgtgtgcaatgtggtgcgtgtgttcaagcgtgt
cctgttggcgcattggttgattctcgtgataaatctcaaggtcgaatcgaagttttaaaa
cccgttgatacgatttgtacatactgcggtgtgggttgtaagttaaccatgatggttgat
gaatcaacaaacaaaattaaatacgttcaaggcgctaaatcgtctccagtgaacgaaggc
atgctgtgtgttaaaggtcgctttggttttgattttgtcagcagtgatgagcgcttaaaa
acaccgttaattcgtaaaaatggtgagttagttcctgcaagttgggaagaggcgatcaca
ttagttgctgataagttcagtaccattaaatctcaacatggcggtaatgcgctagctgga
ttctcgtcggcaaaaaccaccaatgaagataactacgcattccaaaaattggtacgtcgt
gagtttgaaaccaataaccttgatcactgtgcacgtttatgtcactcaacgacagtaacg
ggcttagaagcgtctattggtagtggggcaatgaccaatgatattccaagtattaaacat
tctgatttgatctttattattggttcagataccacatcagctcacccgatcattgcttct
cacattaaacaagccacccgtcatcacggtgctcgtttgattgttgcggatccaaagcaa
gtagatatctctgatcatgctgagctgtatgtagcacaacgtccgggtacggatgtgatg
ctacttaacggtattatgcagcagatcatcaaaaataactggcacgatcaggcatacatc
gctgaacgtgttgaaggttttgatgaactaaaagcagaagttatgtcagaggcgtattca
cctgagaaaattgagttaatcacaggcgtaaaagcacaagatgtgattgaaatggcacgt
tacattggtactgctaaacgtactgctatttattattcaatgggtattacgcagcatacg
acgggccatgataacgttcgatctattgctaacttacaaatgctgtgtggcaacattggt
attgaaggtggtggtattaatccacttcgtggtcaatcaaacgtacaaggtgcgtgtgat
atgggggcattgccaacagatttcccaggttaccaaaaggtcgagaatcctgcggtttat
gagaaatttgtaaaagcgtggaataagccaacattgccaagtaagaaaggcttaacatta
acagaaatcattgatgcagcctgccatgaacaagtaaaaggtctatttgtcatgggtgag
aacccagtattgagtgaccctgatcaagcacacgttattcacggtttagagaaattagat
ttcctagttgtacaagatatctttatgacagaaaccgcagcgtatgctgatgtgatttta
ccgtcgtgctcatttgcagaaaaagcgggtcattttaccaatactgagcgccgtgttcag
cgtatctcacctgcggtaaatcctccgggtgaagcgaaagaagattggtggatcattcaa
gaaattgctaatgcaatgggcggcgaatggaattaccaatcggttgaagatattacagag
gaaatcactcaagtgacgcctcagtaccaaggtatgcattgggatgcgattggtaaaaat
ggacttcaatggccgtgtaatgatgcaaacccacaaggcactcgcattatgcataatcag
cagttcttacgtggtaaaggccaaatggcagcggttccatttagatatgcggcagagctt
ccagatgaagagtatccattagtattaacaacgggtcgcttattggagcagtaccataca
ggcaccatgacacgtaaaaccaaagggttgaacaaccttgctggtccgcgcgctatgatg
agtgtggcagatgctgagcgcttaggtatttcaaacagtgagatggttcgagtatcaaca
cgccgtggtacgattgaagcaccagcgtttgtgactaagcgtatgcaagaaggagtgata
tttgtaccgttccattttgtggaagcggcagcgaataaactgaccacaacagcacttgat
cctcatgccaagatccctgagtttaaagtcgcagcagtgaaggtagaaaaggtattacaa
ccagaacctgaagtctgtgtataa
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