Aliivibrio fischeri ES114: VF_A0281
Help
Entry
VF_A0281 CDS
T00236
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00230
Purine metabolism
vfi00240
Pyrimidine metabolism
vfi01100
Metabolic pathways
vfi01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VF_A0281 (nrdD)
00240 Pyrimidine metabolism
VF_A0281 (nrdD)
Enzymes [BR:
vfi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
VF_A0281 (nrdD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
PSV_ORF131-like_dom
Motif
Other DBs
NCBI-ProteinID:
AAW87351
UniProt:
Q5E0U5
LinkDB
All DBs
Position
II:312151..314271
Genome browser
AA seq
706 aa
AA seq
DB search
MNITVIKRDGSRAAYKSSRIIDAVKGASEQVTPEIESYAKLVAHAVEIALQGQQEVGIRQ
IQELVENELMQGPHKVLARAYIEYRHDRDIAREKISVLNKEISGLIEQSNAELLNENANK
DGKVIPTQRDLLAGIVAKHYATRHILPRDIVQAHERGEIHYHDLDYAPFFPMFNCMLIDL
KGMLTGGFKMGNAEIDTPKSIATATAVTAQIIAQVASHIYGGTTINRIDEILAPYVTVSY
EKALKLAEKWGIPDAEAFAQAQTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WESKLIQRSILENRIAGLGKNRKTAVFPKLVFAIRDGLNHKKADPNYDIKQLALECASKR
MYPDILNYDKVVEVTGSFKTPMGCRSFLDLYEENGEQIHDGRNNLGVVSLNLPRVAIEAK
GDVDTFYKLLDERLVLCRRALESRISRLEGVKARVAPILYMEGACGVRLKPDDDIINIFK
NGRASVSLGYIGVHETIEALFGSDDHLYDNAELQVKALEIIQYLKDAVQVWTKETGFGFS
LYGTPSENLCSRFCKLDNTQFGVIDKVTDKGYYTNSFHLDVQKKVNPYDKIDFEMPYPEI
SSGGFICYGEFPNMQRNIEALENVWDYSYTRVPYYGTNTPIDECYECGYNGEFECTSKGF
TCPKCGNHDSTKVSVTRRVCGYLGSPDARPFNFGKQEEVQRRVKHL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaatataactgtaatcaagcgagatggaagtcgcgcagcatataaaagttctcgtata
attgacgctgtaaaaggtgcttcagagcaggtgactcctgagatagagagttacgctaaa
ttagttgctcatgctgttgagattgcattacagggacaacaagaagtgggcattcgccag
atccaagagctggttgaaaacgaattaatgcaaggaccacataaagtacttgctcgtgct
tatattgaatatcgtcatgatagagatattgctcgtgaaaaaatcagcgtactaaataag
gaaattagtggtctgattgaacaaagcaatgctgagctactgaatgaaaacgcgaataaa
gacggtaaagtgattccaactcaacgtgatttattagcgggtattgtggctaagcactac
gcaactcgtcatattttacctcgtgatattgtacaagcacacgagcgtggtgagattcat
taccacgatttagattatgcaccatttttcccaatgtttaactgtatgctgattgattta
aaaggcatgttaacgggtggctttaaaatgggtaatgcagaaattgatacaccaaaatca
attgcaactgcaactgcggtaacagcacaaattattgcacaagtagcaagtcatatttat
ggcggaactacgattaaccgtattgatgaaattttagcgccttacgtaactgtgagttac
gaaaaagcgttaaaacttgctgaaaagtggggcattcctgatgctgaagcttttgctcaa
gctcaaacagaaaaagagtgttatgacgcattccaatcgcttgaatacgaagtaaacaca
ttacatacagcaaatggacaaacaccatttgtaacatttggttttggtttaggtacgagc
tgggaatctaaactgatccagcgctctattttagaaaaccgtattgctggcttaggtaaa
aaccgtaaaacagcggtattccctaaattagtatttgcgattcgtgatggactaaaccat
aaaaaagcagatccaaactacgatattaaacaattagcattagaatgtgcgtcaaaacgc
atgtacccagatatccttaactatgacaaagtagttgaagtgacgggttcatttaaaacg
ccaatgggctgtcgtagcttcctagatttatatgaagagaacggtgagcaaattcacgat
ggtcgtaataacctaggtgttgttagcttaaacctacctcgtgttgcgattgaagcaaaa
ggtgatgtagatacattctataaactgcttgatgagcgtttagtgctatgtcgtcgtgcg
ctagaatcacgtatttctcgtttagaaggtgttaaagctcgtgttgctccaattctttat
atggaaggggcgtgtggtgttcgtctaaaaccagatgatgacatcattaatatctttaaa
aatggtcgagcatctgtatcgcttggttacattggcgtgcatgaaacaattgaagcacta
tttggtagtgatgatcatctatatgacaatgcagagcttcaagttaaagcattagagatt
attcagtacctaaaagatgcagttcaagtatggacaaaagaaactggctttggctttagc
ttgtatggtactccaagtgaaaacttatgttctcgtttctgtaagcttgataacacacaa
tttggtgtgattgataaagtgacagataaaggctactacacaaacagtttccacttagat
gtacagaagaaagtgaatccttacgataagattgactttgaaatgccatacccagaaatc
tcaagtggtggcttcatttgttatggtgaattccctaacatgcaacgtaacattgaagca
ttagaaaacgtatgggattacagctatacgcgtgttccttattacggcacaaatacaccg
atcgatgagtgctacgaatgtggttataacggtgaatttgaatgtacaagtaaaggcttc
acttgtcctaaatgtggcaatcatgattcaacgaaagtatcagtaacacgtcgtgtgtgt
ggttatttaggtagccctgatgcacgtccatttaacttcggtaaacaagaagaagttcaa
cgtcgagtgaaacatttataa
DBGET
integrated database retrieval system
