Aliivibrio fischeri ES114: VF_A0306
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Entry
VF_A0306 CDS
T00236
Symbol
sapD
Name
(GenBank) peptide transport system ATP-binding protein SapD
KO
K19229
cationic peptide transport system ATP-binding protein
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi01503
Cationic antimicrobial peptide (CAMP) resistance
vfi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VF_A0306 (sapD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VF_A0306 (sapD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vfi02000
]
VF_A0306 (sapD)
Transporters [BR:
vfi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
VF_A0306 (sapD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AAW87376
UniProt:
Q5E0S0
LinkDB
All DBs
Position
II:complement(340400..341413)
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AA seq
337 aa
AA seq
DB search
MPLLDIRHLTIELETPQGMVKAVDRMSLTLNEGEIRGLVGESGSGKSLVAKAILGITKDN
WKISADRMRLGNIDLLALSPKERRRVIGREMAMIFQEPSTCLDPSEQVGNQLKEAIPSKY
FTGSWWQRWNWRTKGAIALLHKVGIKDHKHIMKCYPYELTDGECQKVMIAMAIANKPRIL
IADEPTDELDAVTQSQIFRLLSRMNQVNNTTILLISHDLITLTQWVDRITVMYCGQSVES
ACRKDILEAPKHPYTNALLRAMPDFSKDGIPHKAKLESLPGTIPPLQHLPIGCRLGPRCP
YAQRKCVQVPERQKVKDHKFSCHFPLNFEEKKNDCAS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgccattattagatattcgccatttaaccattgagttagaaacgccacaaggcatggtg
aaagccgttgaccgcatgagcttaaccttaaatgaaggtgaaattcgtggtttagtggga
gaatctggctcaggaaaatctctcgttgctaaagccattttaggtatcactaaagataac
tggaaaatcagtgcagaccgtatgcgtctaggtaacattgatttattagccctatctcct
aaagagcgacgccgagttatcggacgtgaaatggcaatgatcttccaagagccatcaacc
tgccttgacccatcagaacaagtgggtaaccaactaaaagaagcgattccttccaagtac
tttactggtagctggtggcaaagatggaattggcgaacgaaaggtgcaatagccctactc
cacaaggttggtattaaagatcataaacacataatgaaatgctatccatatgaattaacg
gatggtgaatgtcaaaaagtgatgatcgcaatggcgattgccaacaaaccacgtatctta
attgcagatgaaccaaccgatgaattagatgcagtgacacagtcacaaatattccgtcta
ctaagtcgaatgaaccaggttaataacacgacaattttattaatcagccacgacttaatc
acccttactcagtgggtagaccgaatcacggtgatgtattgtggtcaatcggtagaatca
gcttgtcgtaaagatatccttgaagcaccaaagcatccctataccaatgcactgcttcgt
gctatgcctgattttagtaaagatgggatcccacataaagctaagttggaatcactacct
ggcacaattccacctctacaacatttacccattggctgccgtcttgggcctcgttgtcca
tatgcgcaacgtaaatgtgttcaagttccagagagacaaaaagtgaaagatcacaaattt
agctgccatttcccattaaattttgaggagaagaagaatgactgcgcttcttga
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