Aliivibrio fischeri ES114: VF_A0808
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Entry
VF_A0808 CDS
T00236
Symbol
glgB
Name
(GenBank) 1,4-alpha-glucan branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00500
Starch and sucrose metabolism
vfi01100
Metabolic pathways
vfi01110
Biosynthesis of secondary metabolites
Module
vfi_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VF_A0808 (glgB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vfi04147
]
VF_A0808 (glgB)
Enzymes [BR:
vfi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
VF_A0808 (glgB)
Exosome [BR:
vfi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VF_A0808 (glgB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
GlgB_N
Alpha-amylase
DUF5696
Motif
Other DBs
NCBI-ProteinID:
AAW87878
UniProt:
Q5DZB8
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All DBs
Position
II:complement(908344..910491)
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AA seq
715 aa
AA seq
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MQLERAAFSDPFSFLGPQYQSQTTALRVWLPGATSVKVRLSGHVEYQLLSDPRHSGIFVL
NESIDMTEVHYELIIDWSGTEQILDDPYQYHDISPTDAQVHTPKEMYNHLGAHLFNVVRD
GKQIQGVRYLVFAPNASSASVIGDFNQWDGRRHIMQRIDNGLWALFIPEHAVGTKYKFEL
KGPNGESLPHKMDPYGAHNEQYPSFASVVYDQTSYQWNDAKWQQRPVTEKQKEALSFYEL
HAGSWKRNENGDFLTYRELAEQLIPYILDMGYTHIELMPVSEHPFYGSWGYQPIGLFSPT
SRFGTPDDFKYFVDQCHQVGIGVVLDWVPAHFPSDSHGLANFDGTSLFNDPDPRRGWHND
WQSFIYNYDQPHVREFLVSNALYWFEHFHIDGLRVDAVASMLYLDYSRNDGEWIPNWEGG
NHNHGAIALLKWMNEEVYSHYPNAMTIAEESTAFPGVSAPTFAGGLGFGFKWNMGWMHDS
LNYIREDPIHRKYHHDTITFPLVYAFSENFILSLSHDEVVYGKGSILDKMPGDEWQKTAN
LRAYMGYMYGQPGKKLNFMGAEIAQSAEWDHDGQLQWFLTQFERHSGMQSLVRDLNKLYT
TEPALYQKDCEPAGFEWRLQDEAEMSVLAHERLGDNGERILVVSNFTPAPREDFRLGMPV
AGQYELILNSDAHFYGGSDYSVISEASTEKVESQGLAQSIVITLPPLSTVFYRLK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgaaagggctgctttttctgatccattttcttttctaggtccacaatatcaa
agtcaaacgacagcactacgagtttggcttccaggtgctacatcggtaaaagtacgatta
tctggtcatgttgaatatcaattgctttcagacccgagacattcgggtatttttgtatta
aatgaaagcattgatatgacagaagttcattatgaattaattatcgattggagtggaact
gaacaaattcttgatgacccatatcaataccacgatatttcccctacggatgcgcaagtt
catacaccaaaagagatgtataaccatttaggggcgcatctatttaacgttgttcgtgac
ggtaagcaaattcaaggcgttcgttatttagtctttgcccctaatgcctcttcagctagc
gttattggtgattttaaccagtgggatggccgtcgtcatattatgcaacgtatagataac
ggactttgggcgttatttatacctgaacatgctgttggtactaagtataaatttgagtta
aaaggaccaaatggagaatcacttcctcataaaatggatccttatggcgctcataatgag
cagtatccatcatttgcatctgtggtatatgatcaaacttcttatcagtggaatgatgcc
aaatggcagcaaagaccagtaactgaaaagcagaaagaagcgctttcattctatgaattg
catgcagggtcttggaagagaaatgaaaatggcgatttcttaacctatcgtgagttagct
gagcaattaataccttatattttagatatgggttatacgcacatagagctaatgccagta
tcagaacatccattttatggttcatggggctatcaaccaattgggctattttcaccaacg
agtcgttttggtacgcctgatgattttaaatattttgtcgatcaatgccaccaagttggt
attggtgtcgtactagattgggttcctgctcatttcccatcggattcacatggtttggcg
aattttgatggaacatctttgtttaatgatcctgaccctcgtcgtggatggcacaatgat
tggcagagctttatttacaattatgaccaacctcatgtgcgtgaatttttagtttctaat
gcattatattggtttgagcatttccatatcgatggtttgcgtgtcgatgctgtagcatca
atgctttaccttgattattcgcgtaatgatggcgaatggatccctaactgggaaggtgga
aatcataaccacggagccatcgctttattaaagtggatgaacgaagaggtgtattcacat
tatcctaatgcgatgaccattgcggaagaatcaacggcttttcctggggtttcagctcct
acttttgctggtggtttgggctttggctttaagtggaacatgggttggatgcatgacagc
ttaaattacattagagaagacccaattcatcgaaaatatcaccacgataccatcactttc
ccgctagtttatgcatttagtgagaactttatcctttcgctttcacacgatgaagtggtt
tatggaaaaggctcaatcttagataaaatgcctggagatgaatggcaaaaaacggcaaac
ttacgtgcctatatggggtatatgtatggtcagccgggtaagaaattaaacttcatgggg
gctgaaatagctcaaagtgcagagtgggatcatgatggtcaattacagtggttcttaact
caatttgagcgtcactctggtatgcaatcgctagtgcgtgatttaaataaattatacaca
acagagcctgcgctttatcaaaaagattgtgagcctgctggttttgagtggcgactacaa
gatgaagcagaaatgagtgttctagctcatgaacgtttaggtgataatggtgagcgaatt
ctcgttgttagtaactttacaccagcaccaagagaggatttccgtttaggaatgcctgtt
gctggtcagtatgagttgattttaaacagtgatgctcatttttatgggggcagtgattac
tctgtaattagtgaagcatctacagagaaggttgagtctcaaggattagcacaatctatt
gttattacgttaccaccgctttctacggtcttttatcgtttaaaataa
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