Aliivibrio fischeri ES114: VF_A0874
Help
Entry
VF_A0874 CDS
T00236
Symbol
tcpB
Name
(GenBank) toxin coregulated pilus biosynthesis protein TcpB
KO
K10931
toxin coregulated pilus biosynthesis protein B
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi05110
Vibrio cholerae infection
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05110 Vibrio cholerae infection
VF_A0874 (tcpB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vfi02044
]
VF_A0874 (tcpB)
Secretion system [BR:
vfi02044
]
Type II secretion system
Toxin co-regulated pilus biosynthesis protein
VF_A0874 (tcpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_methyl
Motif
Other DBs
NCBI-ProteinID:
AAW87944
UniProt:
Q5DZ52
LinkDB
All DBs
Position
II:complement(985700..987037)
Genome browser
AA seq
445 aa
AA seq
DB search
MLKQQRGATLLEAVLAAAIIGWGLAFAGAQLIKSAKNKQIDKNASKLINFQYEVKQLAST
VYFNVIAPGSGASSKKVNPLLVSSSTGKFMYEKDLRWMKQTDCELLGGISGQIPVGISRP
FVDCDYSPDFFGVEYIGTEFTFVPYNLIKYPSAKRFITSAQSYYVNKSNVEVEDILSIIS
KLSDQKRDDGFSVSDNDIIISKFVKLDDVNYREVPDTAKSWAELIDNISLLDSFIKEVTS
GDNYLGFRIKSFYNEDIYLKRDGSIPMSGKAKLCWDGYSGKEGPCLSASSESDGTRNYLI
ADGGFAFGEKIKRTPIEISYKTFSRSNRNNIEIPYLNCPQTEPVMLNKMVAIPSSFSSGS
EERSDFSDPNSIKSYGTKGASNKHAFISGVSMEWAPVDSRKVWTIKGGIGIDGAYEKDNG
NSSMLNNPLSMSFIVMQWCEEKPKG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaacagcgaggggctactctattagaagctgttcttgctgctgcgataatt
ggctgggggttggcttttgctggcgcccagttaattaaatcagcaaagaacaagcagata
gataagaatgcgtctaaattgataaattttcaatatgaagttaaacaacttgcgtctact
gtttattttaatgttatcgctcctggttctggtgctagtagtaaaaaagttaatcctttg
ctggtttcttcatctacagggaagtttatgtatgagaaggatttgaggtggatgaaacaa
accgactgtgagcttttaggtggcatttctggtcaaatacctgtggggataagtagaccg
tttgttgattgtgattatagtccagacttttttggtgttgaatatatagggactgagttt
acatttgttccatataatttaattaaatatccttcagcaaagcgttttattacttcagct
cagagttattatgtaaataagagtaatgtggaagtagaagatattttatctattatatca
aagctgagcgatcaaaagagagatgacggtttttcagttagtgataatgacataattatt
tctaaatttgttaaacttgatgatgttaattatcgtgaagtgccagatacagcgaaaagt
tgggctgaattaattgataatatatcccttttagattcttttattaaggaggttacatct
ggtgacaactatttgggttttagaataaagagtttttataatgaagatatctatttaaaa
cgtgatggtagtatccccatgtcaggaaaagctaagctttgttgggatggctattctgga
aaagaagggccttgtttatctgcaagcagtgaatctgacggaactagaaactatttgata
gctgatggtggatttgcgtttggtgagaaaataaaacgaacacctattgaaatatcatat
aaaacattttctcgaagcaatagaaataacattgaaataccatatttaaattgtccgcaa
acagaaccggtgatgttaaataaaatggttgcgataccaagttcattttcatctggctct
gaagaaagaagtgacttctcagacccaaatagtattaagagctatggtacaaaaggcgct
agtaataaacatgcattcatttcaggtgtatcaatggaatgggctccagtagattcaaga
aaagtatggacaataaaaggtgggataggtattgacggtgcatatgaaaaagataacgga
aactcgtcaatgttaaataatccactatcaatgtcttttatagttatgcagtggtgtgaa
gaaaaaccaaaaggataa
DBGET
integrated database retrieval system
