Aliivibrio fischeri ES114: VF_A0875
Help
Entry
VF_A0875 CDS
T00236
Symbol
tcpA
Name
(GenBank) toxin coregulated pilin subunit precursor TcpA
KO
K10930
toxin coregulated pilin
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi05110
Vibrio cholerae infection
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05110 Vibrio cholerae infection
VF_A0875 (tcpA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vfi02044
]
VF_A0875 (tcpA)
Secretion system [BR:
vfi02044
]
Type II secretion system
Toxin co-regulated pilus biosynthesis protein
VF_A0875 (tcpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcpA
N_methyl
PilS
Bundlin
Motif
Other DBs
NCBI-ProteinID:
AAW87945
UniProt:
Q5DZ51
LinkDB
All DBs
Position
II:complement(987057..987683)
Genome browser
AA seq
208 aa
AA seq
DB search
MNLKKQRGMTLLEVIIVLGIMGVISAGVVILAQRAIDNQNVSKLSQALNTIQTAMVQTYR
SKQSYPDVLQDAVKAKKLTDALVSMGRVTESDLINPFTGAPMLIFTAKDNKAANRGFAIK
VSDLSKDQCTSLISNSADLFSFIEVQNRGTAMAADFYVDPDATKSVGVIKSTKGGAKTLD
LTNLDHISALCGGPGAGDSYFDVFVGNR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaaaaacaacgaggtatgaccttactagaagtgattatcgttttaggcatt
atgggtgtcatttctgccggtgttgtaatcctagctcaaagagcaatcgataatcagaat
gtatctaagttatcgcaagcgttaaatactattcaaaccgcaatggttcaaacttataga
agtaagcaaagttatcctgatgttcttcaagatgcagttaaggctaaaaagttaactgat
gcattagtgtctatggggagagttactgaatcagatttaatcaacccatttacgggtgct
ccaatgttgatctttacagctaaggacaacaaggcggctaaccgtggttttgctattaaa
gtatctgatttgtcaaaagatcaatgtacctcgttaataagtaactcagcagatctattt
agttttattgaagtacaaaatagaggtacagcaatggcggcggatttttatgttgaccca
gatgcaacaaaatcagttggagttattaaatcaacaaaaggtggtgctaaaactttagat
cttacaaatcttgaccacatctcggctctgtgtggtgggccaggtgcgggtgattcgtac
tttgatgtttttgttggtaatcgttaa
DBGET
integrated database retrieval system
