Aliivibrio fischeri ES114: VF_A1046
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Entry
VF_A1046 CDS
T00236
Symbol
hdfR
Name
(GenBank) DNA-binding transcriptional regulator
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vfi03000
]
VF_A1046 (hdfR)
Transcription factors [BR:
vfi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VF_A1046 (hdfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
AAW88116
UniProt:
Q5DYN0
LinkDB
All DBs
Position
II:1180303..1181172
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AA seq
289 aa
AA seq
DB search
MITLDTDLLKTFLEVTKTRHFGRAAEHLFLTQSAVSFRVRQLESQLGNPLFTRQRHNVQL
TAAGERLLPYAEAILQTWGRAKQDVALTEDYNSQITIGASALIWEFDGISDWINGIYDTI
SGLALRLESIPRQELAKALLEKSVDLFITSEPPKIDGIRVFKIRDYQLQLVSSTPNSTME
TIQSMPLVYLDWGARFAIQHSKIAELQKTPILHTHSSKMALDYLMSHSSIGYLPAPVINQ
SVDNKELYVVEGAPIMEQELYLVWQEKSEKAELIDQITNIKPKMVTSSV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgataactttggatactgatctgcttaaaaccttcttagaagtcacaaaaacgcgccac
tttgggcgtgctgcagagcatttatttctcacacaatctgccgtgagtttccgtgttcga
cagcttgaatcacaactaggaaacccattgtttacgcgccagcgccataatgtacagcta
actgcggcaggtgagcgcttacttccttatgcagaagcaatcttgcaaacttggggaaga
gcaaaacaagacgttgcactaactgaagattacaactcgcaaatcaccatcggcgccagt
gcattaatctgggaatttgatggaatatcagattggataaatgggatctatgacacaatc
tctggtttagcattacgcctagaatccatacctcgtcaagagctggcaaaagcattatta
gaaaaaagtgtcgaccttttcattactagtgaaccaccaaaaattgatggtattcgagta
tttaagattcgagattatcaattacaactcgtttctagcactccaaacagtacgatggaa
accattcaatccatgccattagtgtatttagattggggagctcggtttgcgattcagcat
agtaaaattgctgaactgcaaaaaacgcctattttacatactcattcatcaaaaatggcg
cttgattatttaatgtcgcattcaagcattggttatttgccagccccagttattaaccaa
agtgttgataacaaagagctatacgttgtagaaggcgcaccaattatggagcaagagctg
tatttagtatggcaagaaaaaagcgaaaaagcagagcttattgaccaaattaccaacata
aaacccaaaatggttacctctagcgtttaa
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