Aliivibrio fischeri ES114: VF_A1100
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Entry
VF_A1100 CDS
T00236
Symbol
ompA
Name
(GenBank) outer membrane protein A
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vfi02000
]
VF_A1100 (ompA)
Transporters [BR:
vfi02000
]
Other transporters
Pores ion channels [TC:
1
]
VF_A1100 (ompA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
Toluene_X
OMP_b-brl_3
Porin_7
Motif
Other DBs
NCBI-ProteinID:
AAW88170
UniProt:
Q5DYH6
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All DBs
Position
II:complement(1242013..1242987)
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AA seq
324 aa
AA seq
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MLIISNGTIASESKEEQSHVYLGGQVGVSHFLGACSSNAIECKNYVTGGGLYGGYQFNSW
FALEGSWHDYGSPKTFYGVGDGYYSNATGVDLSVKLSLPVTDNLDLYAKGGAAYNYLSVS
GNDNVHLGMFESDSSIDDIWEIGAEYALAPNWSLRFGTSIIDGIGNAKTGKSDLYFTSLG
LTYKFKAKPEPELKPETIVKLVPEATYYPEQVTLHFEFGESRFVVESKQWHSWNELALSV
KQGQGKVSITGYTDAKGTDSANDIESLRRATYAADMLIKAGVDEERILINSKGSADPLVN
EDLMRNESALNRRVVIQFNRRVGS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgttaattatctctaatggaactatagcttctgaatcaaaagaagaacaatctcatgtg
tatttaggtgggcaggttggcgttagtcactttttaggtgcgtgctcatcaaatgcaatc
gagtgtaaaaattatgtcactggtggtggtctttatggtggttatcagtttaattcttgg
tttgccttagaaggtagctggcatgattacggaagccctaagactttttatggggttggt
gatggttattattcaaatgctacgggtgttgacttatctgtgaagttatcactaccggtt
accgataatcttgatttgtatgcgaaaggtggtgccgcttataactatttatctgtttcg
ggcaacgataatgtgcatcttggcatgtttgaatccgattctagcatagacgatatttgg
gaaattggtgctgaatatgcgcttgctccaaattggagcttgcgatttggaacctcaatt
attgacggtataggtaatgctaaaactggtaaaagtgacctctacttcacctctcttggt
ttgacttataaatttaaagcaaaaccagagccagaacttaagcctgaaacgattgtaaag
ctggtccctgaagcaacctattatccagagcaagttacgcttcattttgaatttggggaa
agccgttttgttgttgaaagtaagcaatggcactcatggaatgaactggcgttaagcgtt
aagcagggacaagggaaagtaagcatcacaggttacaccgacgcaaaaggaacggattca
gcaaatgatatcgaatctttacgaagagcaacttacgctgcagatatgctgattaaagct
ggtgtggatgaagaaagaattctcattaactctaaaggctcagcagacccgcttgtaaat
gaagaccttatgcgaaatgaatcggctctgaatcgtcgagttgttattcagtttaatcgt
agggttgggtcttaa
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