Vibrio fluvialis: AL536_00970
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Entry
AL536_00970 CDS
T04379
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl00040
Pentose and glucuronate interconversions
vfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AL536_00970
Enzymes [BR:
vfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
AL536_00970
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Gene cluster
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Motif
Pfam:
Pectate_lyase22
Tricorn_N
Tricorn_2nd
DUF8203
DPPIV_N
Motif
Other DBs
NCBI-ProteinID:
AMF92089
UniProt:
A0AAX2LV13
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Position
1:complement(194812..195975)
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AA seq
387 aa
AA seq
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MAKGDVIQLAFESFIDSDTQVKVTRLTPTDVICHRNYFYQKCFTKDGSKLLFAGDFDGTR
NYYLVDLNTQQAKQLTEGKGDNTFGGFISDDDRSFFYVKNELNLMKVDLETLEEQVIYTV
DEEWKGYGTWVANSECTKLVGIEILKRDWQPLTSWEKFAEFYHTKPTCRLIKVDIQTGEL
DVVHQDNAWLGHPIYRPFDDSTIGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAPGESC
THEFWIPDGSAMAYVSYFKGMTERVIYKANPDTLENEEVMVMPPCSHLMSNFDGSLMVGD
GCDAPVDVADAESYDIENDPFLYILNTKTKHYAKLAKHSTSWDVLDGDRQITHPHPSFTP
GDTGVLFTSDFEGVPAIYIADIPAELR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggtgatgtaattcagctggcattcgaatcattcatcgacagcgacacccaa
gtaaaagtgactcgtctgactccaacggatgtgatttgtcatcgtaactacttctatcaa
aagtgttttaccaaagacggcagcaaactgctgtttgccggtgactttgatggaacccgt
aactactacctggtcgatctgaacacacaacaggccaagcagcttacggaaggcaaaggt
gacaataccttcggcggcttcatctctgacgatgatcgttctttcttctacgtcaaaaat
gaactgaacctgatgaaagtggacctcgaaacactcgaagaacaggtcatttacaccgtc
gatgaagagtggaaaggttacggcacctgggtggcgaactccgaatgcacgaaactggtc
ggtattgaaatcctcaagcgtgactggcagccactgacctcgtgggaaaagtttgctgag
ttttaccacaccaaacccacctgccgcctgatcaaagtcgatattcaaactggtgaactg
gatgtagtccatcaggacaacgcgtggctgggccacccgatttaccgtccgtttgacgat
tccaccattggcttctgccatgaaggtccgcacgatttggtcgacgcgcgcatgtggctg
gtgaacgaagacggcagcaatgttcgcaagataaaagaacacgcaccgggcgaatcgtgc
actcatgagttctggattccggatggtagcgccatggcctatgtttcttactttaaaggc
atgaccgagcgcgtgatttacaaagccaacccggacacgctggaaaacgaagaagtgatg
gtgatgccgccatgttcacacctgatgagtaacttcgacggctctctgatggtgggtgac
ggctgtgatgcaccggtggatgtggctgacgcggaaagttacgacatcgaaaatgatccg
ttcctctacatcctcaacaccaaaaccaagcactacgccaagctggccaaacacagtaca
tcgtgggatgtgctcgatggtgaccgtcaaatcactcaccctcacccatctttcacaccg
ggtgatacgggcgtgctgtttaccagtgattttgaaggcgtgccagccatttatatcgcc
gacattccggctgaattgcgttaa
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