Vibrio fluvialis: AL536_07160
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Entry
AL536_07160 CDS
T04379
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vfl
Vibrio fluvialis
Pathway
vfl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
AL536_07160
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vfl01002
]
AL536_07160
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfl01011
]
AL536_07160
Peptidases and inhibitors [BR:
vfl01002
]
Cysteine peptidases
Family C82
AL536_07160
Peptidoglycan biosynthesis and degradation proteins [BR:
vfl01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AL536_07160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
AMF93221
UniProt:
A0AAX2LTJ3
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All DBs
Position
1:complement(1544497..1545423)
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AA seq
308 aa
AA seq
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MLRKLLVIGALAASFASNVWAATYDFPMEGSSMVGNTQYHVIEKGETLSDIAKRYDVGFL
ALMAANKGVDPFLPQEGFVLTIPSQIILPKVPYEGIVVNLAELRLYYFEPQIHKVHIFPV
GIGRIGRDTPEMETIISQKRPSPTWTPPQSIRKEYLAKGIELPAVVPAGPDNPLGEYALR
LGYGNGEYLIHGTNKDFGIGMRVSSGCIRMDPKDIEWLFQQVQRGEKVRIIDEPVKVALE
PDRSVFVEAHEPLTRSDGSKKDLALPIELSWWMQEFNKSDAKARAVILAQNGVPVEVVSP
DFSATETD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtaagttattggtgattggggcccttgccgccagttttgcctccaatgtgtgg
gcagccacttatgacttcccgatggaaggcagcagcatggtcggcaatacgcagtatcat
gtgattgagaaaggcgaaacgctgtccgacattgccaaacgttacgatgtcggctttctg
gcgttgatggctgccaataaaggcgtcgacccgtttttacctcaggaagggtttgtgctg
acgatcccgtcacaaatcatcctgccgaaagtgccgtatgaaggcatcgtcgtcaatctg
gctgagctgcggttgtactactttgaaccacaaatccataaagtgcatattttcccggtt
gggattggccgtattggtcgtgacacgccggagatggaaaccatcatcagccagaaacgg
ccaagcccgacttggacgccaccgcaatcgattcgcaaagagtatctcgccaaaggtatc
gaactgccggctgtagtgcctgcggggccggataacccattgggtgaatacgcgttgcgt
ttggggtatggcaatggggaatacctgattcacggaaccaacaaagatttcggtatcggg
atgcgggtcagctccggctgtattcgtatggatccgaaagacattgaatggctgttccaa
caggtacagcgcggcgaaaaagtgcgtatcattgatgaaccggttaaagtggcgctggag
ccggatcgcagcgtatttgtcgaagcgcatgagcctctgacccgcagcgatggcagtaaa
aaagatctcgcgctgccgattgaactgagctggtggatgcaggagtttaataaatcggat
gccaaagcccgagcggtgattctggcccagaatggggtgcccgttgaagtggtcagtccg
gatttctcggccacagaaaccgactga
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