Vibrio fluvialis: AL536_08260
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Entry
AL536_08260 CDS
T04379
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL536_08260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vfl03019
]
AL536_08260
Enzymes [BR:
vfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AL536_08260
Messenger RNA biogenesis [BR:
vfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AL536_08260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AMF93531
LinkDB
All DBs
Position
2:complement(129648..131009)
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AA seq
453 aa
AA seq
DB search
MNNNDLEPSKHRVYTDLDLNIITRQEHNVSRQHISENALKVLYRLNGAGFEAYLVGGGVR
DLLLGGKPKDFDVATNATPEQIRQLFRNCRLIGRRFRLAHIMFGRDIIEVATFRGHHQEN
NKQIASQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDMDDKLI
RLIGDPETRYREDPVRMLRAIRFAVKLDFDIEEETAAPIEHLAPLLRDIPAARLYEESLK
MLQSGYGLETYHLMREYNLFQQLFPTIARHFTDDYSSKTEQMLDLALDSTDQRMEEGKRI
NPAFMFAAMLWYPMMELADELTQHQHFNEYDAVMEASNRILDEVVKSIAIPRRHTATIRE
IWQLQLRLPRRTGKRAFRLMELNKFRAGFDFLEMRGEVEDGETKLLADWWETFQNAGRNM
RQAMVLDLDGGAKTTTPRRRKPSSRKKKSKTSS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaacgatttagaaccaagcaaacatcgcgtatatacagatctagatttgaat
atcatcacgcgccaagagcacaacgtgtctcgtcagcatatcagcgagaatgcgctaaaa
gtgttgtaccgccttaatggggcgggcttcgaggcgtatctggtcggcggcggtgtacgt
gatttactgctgggtggaaaacccaaagatttcgatgtggccaccaatgccacacctgag
cagattcgccagctgtttcgtaactgccgcctgatcgggcgccggttccgtctggctcac
atcatgttcggccgcgatattattgaagtggcgaccttccgtggtcaccaccaagaaaac
aacaaacagattgcgtcacaatctgaagctggcatgctactgcgtgataacgtctacggc
accattgatgaagatgccgaacgtcgtgatttcaccatcaacgccatgtactacaacatc
gccgactacagcattcacgattatgccggcggcatggaagacatggatgataagctgatc
cgtctgattggcgatccggagacacgctaccgcgaagatccggtgcgcatgctgcgcgcg
attcgttttgctgtgaaactcgacttcgacatcgaagaagagaccgctgcgcctatcgaa
cacttagcaccgctgctacgtgacattccggctgcgcgtctgtacgaagaatcgcttaag
atgctgcaatccggctacggcctggaaacgtaccacctgatgcgtgagtacaacctgttc
caacagttgttcccgaccattgcccgtcacttcaccgacgattattcatcaaaaacggag
cagatgctggatctggcgctggactcaaccgatcagcgtatggaagaaggcaaacgcatc
aatccggcatttatgttcgccgcgatgttgtggtatccgatgatggaactggccgatgag
ctgacgcaacaccagcacttcaacgaatacgatgccgtgatggaagccagcaaccgcatt
ctcgacgaagtggtgaaaagcattgctattccgcgccgtcatacggcgaccattcgcgaa
atctggcaattgcaactgcgtctgccacgtcgcaccggaaaacgtgcattccgcctgatg
gagctgaacaagttccgcgccggcttcgattttctggagatgcgtggcgaagtggaagac
ggtgaaaccaagctgctggcagactggtgggaaactttccagaatgcaggacgcaatatg
cgtcaagcgatggtgttagatctagatggtggcgccaaaaccaccacgccgcgtcgtcgc
aagccatcgtcgcgtaagaaaaagagcaaaacctcgtcatga
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