Vibrio fluvialis: AL536_08510
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Entry
AL536_08510 CDS
T04379
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vfl
Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfl03016
]
AL536_08510
Enzymes [BR:
vfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AL536_08510
Transfer RNA biogenesis [BR:
vfl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL536_08510
Prokaryotic type
AL536_08510
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AMF93577
UniProt:
A0AAX2LNV1
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All DBs
Position
2:196625..197572
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AA seq
315 aa
AA seq
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MARRRKGRAINGVLLLDKSTGISSNDILQKVKRLFFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGEVVETRPVHVERETLLAKIESFRGETDQ
VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYDIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYENMVTLEQLNEMVEQAQREDRSPYEILDALL
LPMDTAVQDLPEVNLVPELVHMVQHGQAVQVFGAPSDCFVRLTGGEEKLFLGVGEMNDDG
KIAPKRLVVYPKDAE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcgtaaaggccgtgcgatcaacggtgttctgttactggataagtcaacg
ggcatttcgtcgaacgacattttacagaaagtgaaacgcctgtttttcgccgagaaagcc
ggacacacaggtgctctggatcctctggcaactggtatgctgccgatttgtctcggtgaa
gcgaccaagttctcccagttcctgctcgactccgacaaacgctaccgcgtgattgccaag
ttaggtgagcgcaccgacacctcagactctgacggtgaagtggtggaaacacgcccggtg
catgtcgagcgcgaaacattgctggccaagattgaatcattccgtggcgaaaccgatcag
gtgccatcgatgttttctgcgctgaaatatcaaggacgtccgttgtacgaatacgcacgc
caaggtattgaagtgccgcgtgaagcgcgcaagattacagtgtacgacattgtcctgcat
cgctttgaaggcgatgaagtggagatggaagtgcattgctcaaaaggcacatacattcgt
actatcgttgacgatttaggcgaaatgctgggctgtggtgctcacgtcacgatgctgcgc
cgcactggtgtggcaaagtacccgtacgaaaatatggtcacgctggagcaactcaacgaa
atggttgagcaagcacaacgcgaagatcgctcaccttacgagattttagatgcgttgctg
ctaccaatggataccgcagtgcaggatttgccagaggtgaatctggtacctgaactggtg
cacatggtacaacacggtcaagcggtgcaagtctttggcgcgccaagtgattgcttcgtc
cgtttgactggcggagaggagaaactcttcctgggcgtgggtgaaatgaacgacgatggc
aaaattgcgccgaaacgtctggtggtttacccgaaagacgccgagtaa
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